Gene Mext_0098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_0098 
Symbol 
ID5834688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp102496 
End bp103332 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content66% 
IMG OID641365883 
Productextracellular solute-binding protein 
Protein accessionYP_001637597 
Protein GI163849554 
COG category[T] Signal transduction mechanisms
[E] Amino acid transport and metabolism 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.155933 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCGT CCTTCCTTAA GGTGAGACGC GCCTTCATGG TCTCAGCCAC GTTTTTCGCT 
TGGTCCGGCG TCGAGGCGCG CGAGCTGCGG GTCTGCGCCG ACCCGAACAA TCTGCCCTTC
TCGAACCAAG CCCGGGAGGG GTTTGAGAAT CGGATCGCCG AGGTAATCGC CCGTGATCTC
GGCGCTACTC TCACCTTCAC CTGGTGGGCC CAGCGCCGGG GCTTCCTGCG CAACACCATT
CTCGCCGGGC GCTGCGATCT TGTGACGGGG ATACCGGTCG GGCTCGAGAT GTTGCGACCG
ACACGGCCCT ATTATCGCTC GGCTTTCGTC TTTATTGCGC GAGCTGACGG GCCCACCATC
ACGTCGCTTG ATGACCCGGA ACTGGCCCGC CGCACCGTGG GCGTTCAGCT AGCTGGCAAC
AACGCCGCAG GCACACCACC GGCTCAGGCC CTCGCCCGAC GCGGGCTGAC GCAGAACGTG
CGCGGCTACG TCCTGACCGG GGATTACGAG AAGCCAAACC CACCGGCCCG CATCGTCGAA
GCGGTGGCCA CAGGCGAGGT CGACGTCGCC CTGGCCTGGG GACCGATGGC GGGCTACTTC
GCCGCCCGTA GCACGCCGCC GCTTCGCATC AGCCCAGTCG AGCCCCTCCT CGACGGACCG
AAGGGTCCCA TGGTCTTCGA CATCGCCATG GGTGTGCGGC GGGAGGACGA GGATCTGCGC
CGTGAGGTTG GGGCCGCCCT AGAGCGCAAC CGGACTCAGG TCGATGCCAT CCTAGCTGCC
TACGACGTGC CACGGTTGGA CGTGCTGCGA GATCAAAGCG CGGCGGCTAC GCCATGA
 
Protein sequence
MTSSFLKVRR AFMVSATFFA WSGVEARELR VCADPNNLPF SNQAREGFEN RIAEVIARDL 
GATLTFTWWA QRRGFLRNTI LAGRCDLVTG IPVGLEMLRP TRPYYRSAFV FIARADGPTI
TSLDDPELAR RTVGVQLAGN NAAGTPPAQA LARRGLTQNV RGYVLTGDYE KPNPPARIVE
AVATGEVDVA LAWGPMAGYF AARSTPPLRI SPVEPLLDGP KGPMVFDIAM GVRREDEDLR
REVGAALERN RTQVDAILAA YDVPRLDVLR DQSAAATP