Gene Mext_0085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_0085 
Symbol 
ID5833675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp92517 
End bp93680 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content64% 
IMG OID641365870 
Producthypothetical protein 
Protein accessionYP_001637584 
Protein GI163849541 
COG category[R] General function prediction only 
COG ID[COG4469] Competence protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.56108 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATCC ATATGGGAGG TCACATGGTG GAAGGTGCCG TCCAGGCCGA CACGCGGGAG 
GGGCTGCTCT TCGGTGAACG ACCAAATGGC AGCCTCGTCC ATATCTCCGA GGTGCCCTCC
GGTCTTGCCT GTAACTGCCG ATGTCCGAAC TGCGGGACAC CGCTGGTTGC TCGTAGAGGC
GAGCAGCTGG GCCATCACTT CGGACACCAC AATACCAAGG GCGAGCGCGC CTGCGCGGGG
GGACCGGAGA CCGCGCTGCA CCGCTTTGCC AAGGAGTTGC TCGCAGCCAA ACTCGCCTTC
ATGCTTCCAC CTCTCCACAG GGATGGCGAG GGAACGGCTC GCTACGCTGG TGGACTCCAC
CGGTTCGACA CTGCGCTCCT CGAACACCGG CTCGGAGCCA TTGTGCCGGA CGTGATTGCC
CGCCGGGCGG ACCGGGATCT GCTTGTCGAG TTCCACGTCA CCCACGCCTG TGACGCTACC
AAGATCGCTA AGATTGCGAG CCTTGGCACA GCTGCGATCG AGATTGATCT TTCCGGCTTG
GCACTGAACG CGCCACGGGC TGAGCTTGAG GTGGCCATCC TCGAACGTGC CCCCCGCCGT
TGGCTGCACA ACCCGAAGCT CGGCTGGGTT GGGGATGTTC ACGGCCCGGT GACGAACAGG
ATCACGCCAG CGTCGTCTCG ATCCCTCACT GCTCTGGAGC GAGCCTACGC GTCGGCCTAC
CGCGAGGCAC TATCGACTCC GAGCCAAAGC CTCGCTCGGC AACGCGTTGA GGCGGATGGC
CTCGCATTTG CGATCGGCAT CGAGGTTGCC GGGATCGGGT GCTTCACGGC CTCACCTCGT
GATTGGCAGG CAGTCATCCT CTTGAACGCG CTTGAAGGCG CCCTGGTTGG GCGCAGCAGC
ATTGTGAGTG CCAAGGCGTC TCTGCAACAG AGCCGCGAGC GCGGCTGGCT CCGGCCCCGC
TTTAGCCGCC TCACACCAGC AGAGGCGAAG GCGCTATCCG CGGCACTGCC CTCGTATGCC
TCCCCTGCCG ATGCAATCGC AGCCTGGGCA ATGGCACTGT CTCGGCAAGG CATCCTTGTA
CCGAGCAGTG CGCGCGGTCA GTGGGTGATC CGGCGCGAGA CGTTGCAGCG CGTTCGCGAA
GCACGACAAC AGAAAGATTC TTGA
 
Protein sequence
MSIHMGGHMV EGAVQADTRE GLLFGERPNG SLVHISEVPS GLACNCRCPN CGTPLVARRG 
EQLGHHFGHH NTKGERACAG GPETALHRFA KELLAAKLAF MLPPLHRDGE GTARYAGGLH
RFDTALLEHR LGAIVPDVIA RRADRDLLVE FHVTHACDAT KIAKIASLGT AAIEIDLSGL
ALNAPRAELE VAILERAPRR WLHNPKLGWV GDVHGPVTNR ITPASSRSLT ALERAYASAY
REALSTPSQS LARQRVEADG LAFAIGIEVA GIGCFTASPR DWQAVILLNA LEGALVGRSS
IVSAKASLQQ SRERGWLRPR FSRLTPAEAK ALSAALPSYA SPADAIAAWA MALSRQGILV
PSSARGQWVI RRETLQRVRE ARQQKDS