| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_0065 |
|---|
| Symbol | |
|---|
| ID | 5835335 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 74421 |
|---|
| End bp | 75104 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641365849 |
|---|
| Product | nuclease |
|---|
| Protein accession | YP_001637564 |
|---|
| Protein GI | 163849521 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTCCA GGTCCTGGCT CCTACTTCTG CTTTTCGCCA CACCAGCCAA CGCTGAGCCG
TTCGTTGGCC GAGCCTCGGT TATCGATGGT GACACGCTCG ACGTTAGTGG AACGCGCATC
CGCCTTCACG GTATCGATGC GCCGGAAAGT TCGCAGCTTT GCAAGGACGC CGCAGGAAAG
GATTATCGCT GCGGACAAGC GGCCGCGGTG GCTCTGGCCG ATCACGTCGG TAAACGCGTC
GTGACATGTG AGCCTCGCGA GATTGACCGC TACGGTCGAG TTGTTGCCGT CTGCCGTGCC
GACGCGGAAG ACCTGAACGC CTGGATGGTC GGGCAGGGAC ACGCCGTCGC GTACCGGCGC
TACACCGAGG ACTACGTCAA CGTTGAGCTC ACGGCGAAGG CGCTTCGGCA CGGCATCTGG
GCTGGCACGT TCCAGGATCC GTCCGAGTGG CGGCGCGCGA AGCGTGCCGG CGGTGAATCC
TCGAGGCCTG AGGCAGTTAC GCCACCGAGC AAGGCGAGCG GCTGCACCAT CAAGGGCAAC
ATCTCGGCTA ACGGAAAGCG GATTTACCAC CTGCCCAGTT CGAGCGACTA CGAGCGCACC
CGCATCAACG ACCGCGCTGG CGAGCGCCTG TTCTGCTCGG AGGATGAGGC AAGGGCGGCA
GGCTGGCGGG CGCCGCAACG CTGA
|
|---|
| Protein sequence | MRSRSWLLLL LFATPANAEP FVGRASVIDG DTLDVSGTRI RLHGIDAPES SQLCKDAAGK
DYRCGQAAAV ALADHVGKRV VTCEPREIDR YGRVVAVCRA DAEDLNAWMV GQGHAVAYRR
YTEDYVNVEL TAKALRHGIW AGTFQDPSEW RRAKRAGGES SRPEAVTPPS KASGCTIKGN
ISANGKRIYH LPSSSDYERT RINDRAGERL FCSEDEARAA GWRAPQR
|
|---|
| |