Gene Mext_0048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_0048 
Symbol 
ID5834586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp54670 
End bp55209 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content69% 
IMG OID641365832 
Producthypothetical protein 
Protein accessionYP_001637547 
Protein GI163849504 
COG category[S] Function unknown 
COG ID[COG4371] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGATG CAATGCAAAA ACTTGCTTTG GTGTCGCTGG CTGCACTCGG AATGGGTGCG 
CTGATTGCCG CGGATACCGC CGAGGCCCGT GGTGGCTTTG GCGGCGGTGG CTTCCGAGGC
GGCGGATTCG GCGGTGGCGG CTTCCGCGGC GGCGGCGGCT TTGGCGGCGG ATTCCGGGGC
GGCGGCTTCA GCGGTGGTGG CTTTCGCGGT GGCGGTGCCG TCGCAGGCGG CTGGCGCGGC
GGCGTTGGCG GCTATCGCGG CGTGGCCGGT GGCTACCGCG GCGGTTTCTA CGGCGGGCGC
GGCTTCTACG GCGGTCGTGG CTACGGCTAC CGCGGGTACG GCTATCGGGG CTACGGATAC
GGCGTCGGTG CGGGTCTCGC TGGTCTTGCG GTCGGCACGG CCGTCGGGGC TGCGGCCAGT
AACTATTACG GCGGCTACGG CTACGGCTAC GACAATGCCG ACTATGGTGG CTACGCTCCC
GCCGCCTATG GCTCAAGCTA TCCCGCTTAC GGATACGGGG GCTGTACCTG CGGCTACTAA
 
Protein sequence
MEDAMQKLAL VSLAALGMGA LIAADTAEAR GGFGGGGFRG GGFGGGGFRG GGGFGGGFRG 
GGFSGGGFRG GGAVAGGWRG GVGGYRGVAG GYRGGFYGGR GFYGGRGYGY RGYGYRGYGY
GVGAGLAGLA VGTAVGAAAS NYYGGYGYGY DNADYGGYAP AAYGSSYPAY GYGGCTCGY