| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_0045 |
|---|
| Symbol | |
|---|
| ID | 5835745 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 52134 |
|---|
| End bp | 53255 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641365829 |
|---|
| Product | helix-turn-helix domain-containing protein |
|---|
| Protein accession | YP_001637544 |
|---|
| Protein GI | 163849501 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTGCCAAC GCCCGCCCGC GGTCGTTGGA GACATCGGAT CGCACGAGAG GCCATCTCTC
ATTGGCTTGA CTCGCCCCGG AGTCGCGAAG GCGGTCTACC TCACTCTCGT CGAACTGGGC
GCCAATTTGG ACGAACTGCT CGCCGAGGCG GGGCTTGATC CTCGGACCTT CGACGGCGGC
AGGACCCCTG TCCCATACGC CTCGCTCGGT CGCCTGATCG CTCTGGGAGC CGAGAGGACG
GGTTGTCACC ATCTCGGGCT CCTTGTTGGA CAGCGCGCGA CATTGGCCTC GCTCGGGCTG
CTTGGCCTGC TCATGCGCCA CTCGGACACC ATCGGCGGCG CTTTGCGGGC TCTTGAAGCG
CATGCCGGTG TGCGGAACTG GGGCGCAGTC GTCGGACTCG ATATCGACAG TGAGGTGGCC
GTTCTCAGCT ACTGCCCTTA TGGCTCGGAA GCCGAGAGCA CGGCCCTCCA ATCAGAGAGG
GCACTCGCCA CAATTACAAA CGTCATTCGG GCGTTGGGTG GCTCTGATGC GGCTCTATTA
GAAGTGCTGT TGCCGCGCTC CGCGCCACGC GACACAGCGC CCTACATCAG CTTCTTTCGG
GCGCCCGTGC GGTATGACCA AGAAACGGCC GCGTTGGTGT TTCCAACTCT ACTCCTTGAA
CGGCGCATCA AGGGGGCGGA CCCGGCAGCC CGCGGGAGAG TTGAGGATCG CATCCGCAAG
CTTGAGGCCG AACAGCCTTC CACGCTGAAG GACAAGCTTC GCGAGTACCT CCAAGCCCAG
GTGATGCGGC AGCGCTGTAA GGCCGCGCAT GTGGCGCGAC TGCGACTGGT CCCCCCCCGT
ACCCTGCGTC GTCGGCTGAA AGCCGAGGGC ACGACGTTCA AGCAAATCGC TAACGAAGCG
CAGTTCTCAG TCGCCAAGCA GCTCCTAGCC AATACCAGAA TGAGCATGGC GCAGATCTCG
GCGGCCTTGG ATTTCTCCGA GCCCGCTGCC TTTAGCCATG CGTTCCGACG CTGGTCAGGC
TTCGCGCCCA GTACATGGCG GCGGGAGCAT CAGTCGAAGT GCCTTGGTCG AGAGCAGGAC
GAAAATTCCT ACTCCGCACA GACACAGCAG CCGGTCCGAT AG
|
|---|
| Protein sequence | MCQRPPAVVG DIGSHERPSL IGLTRPGVAK AVYLTLVELG ANLDELLAEA GLDPRTFDGG
RTPVPYASLG RLIALGAERT GCHHLGLLVG QRATLASLGL LGLLMRHSDT IGGALRALEA
HAGVRNWGAV VGLDIDSEVA VLSYCPYGSE AESTALQSER ALATITNVIR ALGGSDAALL
EVLLPRSAPR DTAPYISFFR APVRYDQETA ALVFPTLLLE RRIKGADPAA RGRVEDRIRK
LEAEQPSTLK DKLREYLQAQ VMRQRCKAAH VARLRLVPPR TLRRRLKAEG TTFKQIANEA
QFSVAKQLLA NTRMSMAQIS AALDFSEPAA FSHAFRRWSG FAPSTWRREH QSKCLGREQD
ENSYSAQTQQ PVR
|
|---|
| |