Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_0027 |
Symbol | |
ID | 5832187 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 29045 |
End bp | 29761 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641365811 |
Product | malonate decarboxylase, gamma subunit |
Protein accession | YP_001637526 |
Protein GI | 163849483 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03134] malonate decarboxylase, gamma subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.2409 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGCTCG CTGAGATCCT GGCCTCGCTG TTTCCCGAGG GTCATTCCGT GACCGTGGCG GAGGGGCTTG TGAACGGCGA GGGCCCGTTC CGCGGCGGCC GGCTGGCGGT GATCGGCATT GACGGCGAAA CGGCGCTCGG CGTTGACGGC GCCTGCCGGC TCGCGGGCCA CGTCCTCGAC GTGGTGCGCC GGGGCGGTGC CACCCCGATC CTGGTGGCGA TCGATTCCGA CAGCCAGCGC ATGAGCCGGC GCGACGAGTT GCTCGGCCTC AACGAGTATC TCGCCCACCT CGCCAAGACG CTGCTGCTCG CCGACGCAAA GGGCCACCCC ACGGTCGGCC TGATCTACGG CCACTCGGCG GCGGGCGCCT TCATCGCCAC GGCCCTCGCC ACCCGCGTCC TCGTCGGCCT GCCGGGGGCG AATCCGAGCG TGATGGACCT GCCTTCCGTC GCCCGCGTCA CCAAGCTGCC CCTCGACCGG CTGGAGGCGA TGGCGAAGGA CACGCCCGTC TTCGCGCCGG GTCTCGACAA CATGGTGCGC ACCGGCGCGG TGCAGTCGGT GCTTGACCCC GAGCGGTCGC TGGCAGAGCA GATCGCCGCC GTGATCGACG CGCTGCCCAC CGAGGATACC CGCGACCGCG CCGGGCGTGA GCGCGGCGGA CGACCGGTGG CCGAGGCGAT CGCCGCGCAG GTGGTGCGGG AGGCCGCTTT TGGTTGA
|
Protein sequence | MTLAEILASL FPEGHSVTVA EGLVNGEGPF RGGRLAVIGI DGETALGVDG ACRLAGHVLD VVRRGGATPI LVAIDSDSQR MSRRDELLGL NEYLAHLAKT LLLADAKGHP TVGLIYGHSA AGAFIATALA TRVLVGLPGA NPSVMDLPSV ARVTKLPLDR LEAMAKDTPV FAPGLDNMVR TGAVQSVLDP ERSLAEQIAA VIDALPTEDT RDRAGRERGG RPVAEAIAAQ VVREAAFG
|
| |