Gene Mext_0006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_0006 
Symbol 
ID5831599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp4936 
End bp6783 
Gene Length1848 bp 
Protein Length615 aa 
Translation table11 
GC content69% 
IMG OID641365791 
ProductATP-dependent DNA helicase RecQ 
Protein accessionYP_001637506 
Protein GI163849463 
COG category[L] Replication, recombination and repair 
COG ID[COG0514] Superfamily II DNA helicase 
TIGRFAM ID[TIGR01389] ATP-dependent DNA helicase RecQ
[TIGR00614] ATP-dependent DNA helicase, RecQ family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.354235 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCTC GCCTCGACGA GGCCCGCGCC GCGCTGAAAA AAACCTTCGG CTACGACGAT 
TTCCGTCCCG GCCAGGATGA GGTGATCGGC GCCGTGCTCG ACGGAACGGA CGTGTTCGCG
GTGATGCCGA CGGGCTCGGG CAAGTCGATG ACCTACCAAT TGCCGGCCCT GGTCGATGCC
GGGCTCACCG TCGTGGTCTC GCCGCTGATC GCGCTGATGC ACGATCAGGT GCAGCAGATG
CACGCCTTCG GCATCGAGGC GGCGACCCTC AACTCGACGA TCGCGGAGAC GGCGTCGCGG
GAGACGTGGC GCAAGATCCG CTCCGGCGAG CTGCGCCTGC TGTTCGTTTC GCCGGAACGT
CTGCTGATGG ACGGCTGCAT GGAGGCCCTG CGTGGGGCCG GCGTGCGGCG GCTCGCGGTG
GACGAGGCGC ACTGCGTCTC GCAATGGGGC CACGATTTCC GCCCCGAATA CCGCGAGATC
GCCCGCGCCC GCGAGGCGCT CGGCAACGTG CAGACCCTGG CGCTCACCGC CACCGCCGAC
GCCGCGACCC GCGCCGAGAT CGCCGAGCGG CTGTTTCCGG CGGGGCGGCC CCCGAGAACC
TTCGTCCACT CCTTCGACCG GCCCAATATC CGGCTGACCT TCCAGCCCAA GGACAACCCG
ACCCGCCAGT TGGAGCGCTT CCTGCGTGAC CGCCGCGCGG AGAGCGGCAT CATCTACTGC
TCCTCGCGCA AGCGGGTGGA ACAGCTCGCC GACACGCTCA AGGGGGACGG CTTCAACGCC
CTGCCCTATC ATGCCGGGCT CGATCAGGTC ACGCGGGCGA GGAACCAAGA CACCTTCCTG
CAGGAGGACG GCGTGGTGAT GACCGCCACG ATCGCCTTCG GCATGGGCAT CAACAAGCCG
GATGTGCGCT ACGTCTGCCA CTCCGACATG CCGACCAACA TCGAGGGCTA CTATCAGGAG
ATCGGCCGCG CCGGCCGCGA CGGGCTGCCC TCCGACACCC TGACCCTCTA CGGCCTCGAC
GACATGGCGC TGCGCCGCCG CCAGATCGAC GAGAAGGAAA TCTCAGAGGA GCGCCGCCGG
GTCGAGCGGC GCAAGCTCGA GGCGATGATC GCTCTGTGCG AGGGCGCTGC CTGCCGCCGC
CAGTCGCTGC TCGGCTATTT CGGCGAGGCG AGCGAGCGCT GCGGGCGCTG CGATCTCTGC
CGCGGCGGCA TCGCCCTCAT CGACGGGACG GTGGCAGCCC AAAAGCTGCT CTCCGCCATC
GTCCGCACCG GGCAGCGCTT CGGCGCGGCT TATGTCTGCG ACGTGGTGCA TGGCAAGGAG
AGCGAATCCA TCCGTCGTAA CGGCCATGCT GCGCTCAAGA CTTTCGGTGT CGGCAACGAC
AAGCCGGTGG CGGCGTGGCG CGCCCTGCTG CGCCAGCTCT TCGCGGCCGG AGCGGTGGCC
GAGAACACCG ACGGCTATGG CGGCCTCGTG ATGACCGAGA AGGGCGAGGC CATTCTGTTC
GGCCGTGAAA CGATCGAGGT CAGGCCCGAT CCGGAGCCGA AGAAGGCCGA GCCGAGGAGC
CGCCGTGCCA CGCCGCGCGA CGACGAGGCG AATGCGCTGA GCGAGGCGGA CGAAGCGCTG
TTCCAGCACC TGCGGGGCCT TCGCGCCACC ATCGCGCGGG CGGAAGGCAT CGCCGCCTTC
ATGGTGTTCC CCGACCGCAC CCTGATCGAG ATGGCGCGCT CAAAACCCGT CGATCTCTGG
GCGCTCCGAA CCGTCCATGG CGTCGGCGAG CGCAAGCGCG AGGCCTATGG CGAGCGCTTC
ACCGACACGA TCCGTGAATT CCTGGCCGAC GCGAAGCGCG CCGGCTGA
 
Protein sequence
MTARLDEARA ALKKTFGYDD FRPGQDEVIG AVLDGTDVFA VMPTGSGKSM TYQLPALVDA 
GLTVVVSPLI ALMHDQVQQM HAFGIEAATL NSTIAETASR ETWRKIRSGE LRLLFVSPER
LLMDGCMEAL RGAGVRRLAV DEAHCVSQWG HDFRPEYREI ARAREALGNV QTLALTATAD
AATRAEIAER LFPAGRPPRT FVHSFDRPNI RLTFQPKDNP TRQLERFLRD RRAESGIIYC
SSRKRVEQLA DTLKGDGFNA LPYHAGLDQV TRARNQDTFL QEDGVVMTAT IAFGMGINKP
DVRYVCHSDM PTNIEGYYQE IGRAGRDGLP SDTLTLYGLD DMALRRRQID EKEISEERRR
VERRKLEAMI ALCEGAACRR QSLLGYFGEA SERCGRCDLC RGGIALIDGT VAAQKLLSAI
VRTGQRFGAA YVCDVVHGKE SESIRRNGHA ALKTFGVGND KPVAAWRALL RQLFAAGAVA
ENTDGYGGLV MTEKGEAILF GRETIEVRPD PEPKKAEPRS RRATPRDDEA NALSEADEAL
FQHLRGLRAT IARAEGIAAF MVFPDRTLIE MARSKPVDLW ALRTVHGVGE RKREAYGERF
TDTIREFLAD AKRAG