Gene Mext_0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_0004 
Symbol 
ID5831315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp4190 
End bp4594 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content65% 
IMG OID641365789 
ProductPilT domain-containing protein 
Protein accessionYP_001637504 
Protein GI163849461 
COG category[S] Function unknown 
COG ID[COG3742] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.162666 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGTAG ACGCGTCGGC GATCATCGCG ATCATCGCAC GCGAGCCGCA GGCGGAAACA 
TTGACGGCCC GGCTCGAGGA GGCGCCCGTC CGCTATACCT CGGCAGTGGC CGTCTTGGAA
ACGGTGATGG CCTTGCGGCG CCTCGGTGCG GGATCGATCG CGCAAGCAGA GCAACTGGTG
CGACATCTGC TCGAGCATGC GGATATTGAG GAAGTCCCCA TCACAACGCG GGAGTCGGCT
GCGGCCATCG CCGCATACGC GCGCTACGGC AAAGGCCAGG GCCACCCTGC CCAACTCAAC
CTCGGCGACT GCTTCGCCTA TGCCTGCGCT CGAACGCGCA ACGTCCCGCT TCTCTTCGTC
GGCAACGACT TCTCGCAGAC CGACATCGCC GCTGCATTGG CCTGA
 
Protein sequence
MFVDASAIIA IIAREPQAET LTARLEEAPV RYTSAVAVLE TVMALRRLGA GSIAQAEQLV 
RHLLEHADIE EVPITTRESA AAIAAYARYG KGQGHPAQLN LGDCFAYACA RTRNVPLLFV
GNDFSQTDIA AALA