Gene YpAngola_A4130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A4130 
SymboluhpC 
ID5802610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp4417067 
End bp4418428 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content47% 
IMG OID641341906 
Productregulatory protein UhpC 
Protein accessionYP_001608410 
Protein GI162418146 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID[TIGR00881] phosphoglycerate transporter family protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.543128 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.246836 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCACTTAC AAAATACCCT GAGGCCCGAG ATGTGGTTTT TCCTCAAAAG TCGCGATAAC 
GTACCGCTAG TAACGGATCA AACACAAATT GATTCATCCT ATAAGTATTG GCGTATCCAA
TTAATGTGGA CGATGTATAT CGGCTACGCT GCGTTTTATT TCACTCGTAA AAGTTTCAAT
TTTATTATGC CTGCTATGCT CACGGATCTA GGGCTGAGCA TGTCTGATGT CGGGATTTTA
GGCACGCTGT TTTACATCAC TTACGGCTGC TCTAAATTTG TCTCTGGGAT GATCAGCGAT
CGCTCAAATC CGCGTTATTT TATGGGGATC GGGTTGGTCA TGACGGGGAT TATTAATATC
CTGTTTGGCA TGAGCTCATC ACTTTTGGTC CTTGGCGCCT TGTGGATCCT CAATGCGTTC
TTCCAAGGTT GGGGCTGGCC ACCATGTTCT AAAATATTGA CCAGTTGGTA CTCGCGTTCT
GAACGTGGTG GCTGGTGGGC TATCTGGAAC ACCTCACATA ACTTTGGCGG GGCGCTGATC
CCCTTGCTCG TCGGGGTGAT TACTCTGCAC TTTAGCTGGC GCTACGGGAT GATCATCCCC
GGAATTATAG GTGTGGTGAT TGGTTTGCTG ATGTGTTGGC GTCTGCGAGA TAAGCCAAGC
ACCATGGGCC TACCAAGTGT GGGTAAATGG CGCAATGATG CGATGGAGCT GATCCAGGAA
TCCGAAGGCC AGGGGCTGTC TAATAAAGAA ATTGTGAAGC GTTATGTCTT AACCAATAAA
TATATTTGGT TGTTAGCCGT TTCCTATGTG CTGGTTTATA TCGTTCGAAC CGCGATTAAT
GACTGGGGTA ACCTCTATCT GACCCAAGAG AAAGGTTATT CGTTGCTGAC CGCTAACTCT
GCAATTTCAT TATTTGAAGT GGGTGGATTT ATTGGTTCAT TGGTCGCGGG TTGGGGTTCT
GATAAGTGGT TCCGTGGCAA TCGTGGGCCG ATGAACCTGA TTTTTGCTAT TGGTATCTTC
CTCTCAGTTG CATCACTGTG GACGTTGCCA AGCATCAGTT TTGTCTTACA GGCAGGCTGC
TTCTTTGCGA TTGGTTTCTT TATTTTCGGG CCACAAATGC TGATTGGTAT GGCTGCTGCT
GAGTGCTCTC ATAAGGATGC CGCTGGCGCT GCAACCGGCT TTGTTGGGCT ATTTGCCTAT
TTAGGGGCGG CTTTATCGGG TTACCCTATC GCTCGCGTCA TGGAAATCTG GCATTGGAAT
GGTTTCTTTG TGGTTATCTC TGTGGCGGCA TGTTTATCTG CTTTCTTCTT ATTGCCATTC
CTGCGGGCGC AATCGCCGCA GTTAAAGCAA GCGACAACCT GA
 
Protein sequence
MHLQNTLRPE MWFFLKSRDN VPLVTDQTQI DSSYKYWRIQ LMWTMYIGYA AFYFTRKSFN 
FIMPAMLTDL GLSMSDVGIL GTLFYITYGC SKFVSGMISD RSNPRYFMGI GLVMTGIINI
LFGMSSSLLV LGALWILNAF FQGWGWPPCS KILTSWYSRS ERGGWWAIWN TSHNFGGALI
PLLVGVITLH FSWRYGMIIP GIIGVVIGLL MCWRLRDKPS TMGLPSVGKW RNDAMELIQE
SEGQGLSNKE IVKRYVLTNK YIWLLAVSYV LVYIVRTAIN DWGNLYLTQE KGYSLLTANS
AISLFEVGGF IGSLVAGWGS DKWFRGNRGP MNLIFAIGIF LSVASLWTLP SISFVLQAGC
FFAIGFFIFG PQMLIGMAAA ECSHKDAAGA ATGFVGLFAY LGAALSGYPI ARVMEIWHWN
GFFVVISVAA CLSAFFLLPF LRAQSPQLKQ ATT