Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A3984 |
Symbol | rrmJ |
ID | 5802462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 4237811 |
End bp | 4238452 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641341769 |
Product | 23S rRNA methyltransferase J |
Protein accession | YP_001608279 |
Protein GI | 162419181 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0293] 23S rRNA methylase |
TIGRFAM ID | [TIGR00438] cell division protein FtsJ |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000000489521 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGAAAAAG AGATGTCTAA TAAAAAGCGT TCGGCTAGCT CCAGTCGCTG GTTACAAGAA CACTTTAGCG ATAAATATGT AATTCAGGCA CAGAAAAAGG GGCTACGCTC TCGTGCCTGG TTTAAACTTG ATGAAATACA ACAGAGCGAT AAACTTTTTA AACAGGGTAT GACAGTTGTT GACCTAGGTG CAGCCCCTGG TGGTTGGTCC CAATATGCTG TAACCCAGAT TGGCAGTAAA GGGCGAGTTA TCGCATGTGA TCTTCTACCA ATGGATCCTA TCGTTGGTGT CGATTTCCTT CAGGGCGATT TTCGTGATGA ACTGGTCCTG AAAGCTTTAC TTGAGCGCGT TGGGGATAAA AAAGTTCAGG TGGTCATGTG TGATATGGCC CCGAATATGA GTGGTACTCC GGCAGTCGAT ATACCTAAAT CAATGTATCT GGTTGAATTA GCTTTAGATA TGTGTCGTGA TGTACTTGCA CCAGGTGGAA GTTTCCTGGT GAAGGTGTTC CAGGGAGATG GCTTTGATGA ATACCTACGG GAAATTCGCT CCCTGTTTAC GAAAGTTAAG ATTCGTAAGC CAGACGCTTC TCGTGCGCGA TCGCGTGAAG TATACATTGT AGCGACAGGG CGGAAACTGT AG
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Protein sequence | MEKEMSNKKR SASSSRWLQE HFSDKYVIQA QKKGLRSRAW FKLDEIQQSD KLFKQGMTVV DLGAAPGGWS QYAVTQIGSK GRVIACDLLP MDPIVGVDFL QGDFRDELVL KALLERVGDK KVQVVMCDMA PNMSGTPAVD IPKSMYLVEL ALDMCRDVLA PGGSFLVKVF QGDGFDEYLR EIRSLFTKVK IRKPDASRAR SREVYIVATG RKL
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