Gene YpAngola_A3967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A3967 
Symbolmpl 
ID5802445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp4222951 
End bp4224333 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content50% 
IMG OID641341753 
ProductUDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 
Protein accessionYP_001608263 
Protein GI162420115 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0773] UDP-N-acetylmuramate-alanine ligase 
TIGRFAM ID[TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATTC ACATCTTAGG TATCTGCGGC ACATTTATGG GGGGCTTGGC GATGCTCGCC 
CGATCACTGG GACATGAAGT GACCGGAGCG GATGCTAACG TGTATCCACC AATGAGTACT
TTGCTTGAGA ATCAAGGCAT TGACTTAATT CAAGGCTATG ATCCTGCCCA ACTGAATCCA
ATACCGGACC TGGTGATTAT TGGTAATGCG ATGACTCGCG GTAACCCGTG TGTAGAAACA
GTATTGGAGC AAGGCATTCC ATATGTGTCA GGCCCACAGT GGTTGCATGA CCATGTGCTC
CCCGAGCGCT GGGTGCTGGC GGTCGCGGGG ACTCATGGTA AGACGACAAC CGCTGGCATG
CTGGCTTGGA TCCTCGAAGC CTGCGGTTAT GAACCCGGTT TCGTGATTGG TGGGGTACCG
GGTAATTTCG ATGTCTCTGC CCGCTTAGGT AATAGCCCAT TTTTTGTGAT TGAAGCGGAT
GAATATGATT GTGCCTTCTT TGATAAGCGC TCTAAATTCG TTCATTACAG CCCACGCACC
CTGATCATGA ATAACCTTGA GTTCGATCAT GCTGATATTT TTGATGATAT TAAGGCGATT
CAAAAGCAAT TCCATCATCT GGTCCGTTTG GTGCCAGGGA AGGGTAAGAT TATTTTGCCG
GATAATGATA ATCACCTGAA ACAAGTGATG GCGATGGGGT GCTGGAGTGA GCAAGAGCTG
GTGGGCGAAA CCGGCAGTTG GTTTGCCCGC AAAGTCTCTA CCGATGCCAG TGTTTATGAA
GTTTTACTCG ATAATAATGT GGTCGGCGAA GTGAACTGGT CATTGGTGGG TGAGCACAAT
ATGCATAATG GCCTGATGGC GATTGCGGCC GCTCGCCACG TTGGCGTGCT ACCGGCTGAT
GCTTGCCGGG CATTAGGTGA TTTTATTAAT GCCTCCCGCC GGTTGGAACT ACGCGGAGAA
GCGCATGGTG TCACGGTTTA TGATGATTTT GCTCACCATC CTACCGCTAT TCTTGCCACG
CTGGCGGCCC TGCGCAGTAA AGTCGGTGGA ACAGCACGGA TTCTGGCCGT ACTGGAGCCA
CGCTCTAATA CGATGAAACT GGGGTTATGC AAAAATGAGC TGGCACCTTC ATTAGGTCGC
GCGGATGAAG TATTTCTGTT CCAGCCGCAG CACATTCCTT GGCAAGTGGT TGAGGTAGCT
GAAGCCTGTA TCCAGCCAGC GTATTGGAGT GCTGATATCG ATCAGTTAGT TGATATGATT
GTGAAAACAG CACAGCCTGG CGACCATATT CTGGTGATGA GCAACGGTGG ATTTGGCGGG
ATTCACGATA AATTGCTTAG TGCATTGGAT AAAAAAGCAG AACAAGCAAC GGCACTGTTT
TAG
 
Protein sequence
MRIHILGICG TFMGGLAMLA RSLGHEVTGA DANVYPPMST LLENQGIDLI QGYDPAQLNP 
IPDLVIIGNA MTRGNPCVET VLEQGIPYVS GPQWLHDHVL PERWVLAVAG THGKTTTAGM
LAWILEACGY EPGFVIGGVP GNFDVSARLG NSPFFVIEAD EYDCAFFDKR SKFVHYSPRT
LIMNNLEFDH ADIFDDIKAI QKQFHHLVRL VPGKGKIILP DNDNHLKQVM AMGCWSEQEL
VGETGSWFAR KVSTDASVYE VLLDNNVVGE VNWSLVGEHN MHNGLMAIAA ARHVGVLPAD
ACRALGDFIN ASRRLELRGE AHGVTVYDDF AHHPTAILAT LAALRSKVGG TARILAVLEP
RSNTMKLGLC KNELAPSLGR ADEVFLFQPQ HIPWQVVEVA EACIQPAYWS ADIDQLVDMI
VKTAQPGDHI LVMSNGGFGG IHDKLLSALD KKAEQATALF