| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A3904 |
|---|
| Symbol | |
|---|
| ID | 5802382 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | - |
|---|
| Start bp | 4147184 |
|---|
| End bp | 4148665 |
|---|
| Gene Length | 1482 bp |
|---|
| Protein Length | 493 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641341695 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001608205 |
|---|
| Protein GI | 162421457 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3517] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR03355] type VI secretion protein, EvpB/VC_A0108 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTTAC ATGAAGAAAA TACCGTTTTA GCGGCAGAAC CTGCCAGTGC AACATTCTTG
CTCGACGAAA TCATGTCACA AACCCGTATG GCACCGGGAA ACGATGGTTA CGATATCGCT
AAACAGGGTG TGGCCGCTTT TATTAGCAGT ATTCTGGATA CCGGAACCAA CGAAGAGCCG
ATTAACAAGC TGTTAGTTGA CCGCATGATC ATCGAACTCG ACAAAAAGTT GAGTGCTCAG
ATGGACGAGA TCCTACATGC TAACGAATTC CGTGAAATAG AATCTTCATG GCGCTCATTG
AAGCTGTTGG TGGATCGGAC CGATTTCCGT GAAAACATCA AAATCAATAT CATGCATGCA
ACGAAAGAAG AGTTGCTGGA AGATTTTGAG TTCTCGCCAG AAATTATTCA GTCAGGCTTC
TACAAACACG TTTATTCCTC AGGGTACGGC CAATTCGGTG GTGAACCCAC TGCCGCGATC
ATTGGTAACT ACGCGTTCAA CAATAGCTCA CCTGACATGA AGCTCTTGCA ATACGTAAGT
GCTGTTGGCG CGATGGCACA TGCCCCCTTC TTATCCAGTG TGGCCCCTGA TTTCTTTGGC
ATCAGCAGCT TCACTGAGTT ACCCGCGATT AAAGATCTGA AATCTGTATT TGAAGGGCCG
GCTCACACCA AATGGCGTGC TCTGCGTGAG TCTGAAGATT CACGTTATCT TGGTTTGACC
ACTCCTCGTT TCCTGTTGCG CTTACCTTAC TCGACCGTTG AAAACCCCAT TAAAAACTTC
AACTACTACG AGGATGTCAG CCGGAATCAC GAGCATTTCT TGTGGGGCAA CACCGCATTC
CTGCTAGCGT CCTGCCTGAC CGACAGCTTC GCCAAGTACC GTTGGTGCCC GAATATTATT
GGGCCGCAAA GTGGCGGCAC GGTTCACGAT CTCCCGGTTC ATCTCTATGA AGCGATGGGG
CAGATTCAGG CCAAAATCCC AACCGAAGTT CTGATCACTG ACCGTCGTGA GTTTGAACTG
GCGGAAGAGG GCTTTATCAC CCTGACCATG CGTAAAGGCA GTGATAACGC CGCATTCTTC
TCGGCGAATT CGGTGCAAAA ACCAAAAGTC TTCCCGAATA CCCGCGAAGG GAAAATGGCA
GAAACCAACT ACAAGTTGGG CACGCAACTG CCGTACATGT TTATCATCAA CCGCCTTGCG
CACTACATCA AAGTGCTCCA GCGCGAGCAG ATTGGTTCAT GGAAAGAACG ACAGGATCTG
GAGCGCGAGC TCAATATCTG GCTCAAGCAG TACATTGCCG ATCAAGAAAA CCCACCAACG
GATGTTCGTA GCCGTCGTCC TCTGCGTTCA GCGCAAATCC AGGTACTGGA TGTTGAAGGT
GATCCGGGCT GGTACCAGGT TGCGATGCAG GTTCGCCCGC ATTTCAAATA CATGGGGGCG
AGCTTCGAGC TGTCACTGGT TGGCCGTTTG GATAAGGAAT AA
|
|---|
| Protein sequence | MPLHEENTVL AAEPASATFL LDEIMSQTRM APGNDGYDIA KQGVAAFISS ILDTGTNEEP
INKLLVDRMI IELDKKLSAQ MDEILHANEF REIESSWRSL KLLVDRTDFR ENIKINIMHA
TKEELLEDFE FSPEIIQSGF YKHVYSSGYG QFGGEPTAAI IGNYAFNNSS PDMKLLQYVS
AVGAMAHAPF LSSVAPDFFG ISSFTELPAI KDLKSVFEGP AHTKWRALRE SEDSRYLGLT
TPRFLLRLPY STVENPIKNF NYYEDVSRNH EHFLWGNTAF LLASCLTDSF AKYRWCPNII
GPQSGGTVHD LPVHLYEAMG QIQAKIPTEV LITDRREFEL AEEGFITLTM RKGSDNAAFF
SANSVQKPKV FPNTREGKMA ETNYKLGTQL PYMFIINRLA HYIKVLQREQ IGSWKERQDL
ERELNIWLKQ YIADQENPPT DVRSRRPLRS AQIQVLDVEG DPGWYQVAMQ VRPHFKYMGA
SFELSLVGRL DKE
|
|---|
| |