| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A3891 |
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| Symbol | hasE |
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| ID | 5802369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010159 |
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| Strand | - |
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| Start bp | 4128322 |
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| End bp | 4129650 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641341682 |
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| Product | HlyD family hemolysin secretion protein |
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| Protein accession | YP_001608192 |
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| Protein GI | 162418329 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.76201 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCCTG AATCAGTCTG TTATTCGGTT GCGAATGCCA ATCGCCAACC ACCACTCCAA
ATAAACAGTG GGCGCTATCT CAATATAGGT GGGGGGCTGG TCGTTATCGG CTTCATCGGC
TTTTTACTTT GGGCGGGGTT AGCGCCGTTA GATAAAGGCG TTGCCGTGAC CGGGCTGCTT
GTGGTGGCAG AAAACCGCAA AGTGATCCAG CCGCTGCAAG GGGGGCGTAT TCAGCAACTG
CATGTCACTG AAGGCGACGA AATAGTGTCT GGGCAATTAT TGGTCACGCT GGATGACACG
GCGATACGCA ATCAGCGGGA TAATTTACAG CATCAGTATC TAAGCGCCCT TGCTCAGGAA
GCACGTTTAA CTGCTGAGCA AAACGATCTG GATGTGATCA CTTTCCCGCA GGCGCTGCTT
GAGCACGCAA CACAACCAGC GGTTGAACGT AATATTATTT TGCAGCAACA GCTTTTACAT
CACCGCCGCC AGGCGCACTT GAGTGAAATC GCCCGGTTAT CGACACAGCT CACTCGCCAT
CAGGCTCGGC TCGATGGGTT GCAAGCTATG CGGAGCAATC ATCAACGTCA ATCCAATTTA
TTCCAGCAAC AATTAGACAG TGTGCAGTTA TTGGCAAAGG ATGGTCATAT TGCCAAAAAT
AAATTGTTAG AAATGGAAAG CCAGTCAACC TCACTCCAGG CACGAGTAGA ACAAAGTACC
AGCGATATTG CGGAAGCACA TAAGCTTATC GATGAAACAG AACAACATGT TTTACAACGG
CGCGAACAAT ATCAAAGTGA GAATAGCGAG CAATTAGCCA AGGCACAGCA AAACACCCAA
GAACTGGTCC AACGTTTAAA TATTGCAGAA TATGAATTGA GTCATACCCG TATTTTTGCA
CCAGTCAGTG GTTCAGTTAT CGCATTGGCT CAACACACTG TGGGGGGCGT AGTAAGCTCA
GGGCAGGCAT TAATGGAAAT TGTCCCCAGT GGGCAGCCGT TATTCGTTGA GGCTCAGTTG
CCGGTGGAGC TAATTGATAA GGTTGCGGTC GGGCTACCTG TAGATCTCAA TTTTTCTGCG
TTTAATCAAA GTAATACCCC CCGGCTACAA GGCTCTGTAT GGCGCATCGG AGCCGATCGT
ATACAACCCC CACCTACTTC ACCGCCTTAT TACCCTTTAA CCGTTGCGAT TGATCTTGAC
CCGACGGAAC TGGCAATCCG TCCAGGTATG GCCGTTGATG TTTTTATACG TACCGGAGAA
AGGTCATTAC TCAGCTATTT ATTTAAGCCA TTCACTGATC GCCTGCACCT CGCGTTAGCC
GAGGAATAA
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| Protein sequence | MLPESVCYSV ANANRQPPLQ INSGRYLNIG GGLVVIGFIG FLLWAGLAPL DKGVAVTGLL
VVAENRKVIQ PLQGGRIQQL HVTEGDEIVS GQLLVTLDDT AIRNQRDNLQ HQYLSALAQE
ARLTAEQNDL DVITFPQALL EHATQPAVER NIILQQQLLH HRRQAHLSEI ARLSTQLTRH
QARLDGLQAM RSNHQRQSNL FQQQLDSVQL LAKDGHIAKN KLLEMESQST SLQARVEQST
SDIAEAHKLI DETEQHVLQR REQYQSENSE QLAKAQQNTQ ELVQRLNIAE YELSHTRIFA
PVSGSVIALA QHTVGGVVSS GQALMEIVPS GQPLFVEAQL PVELIDKVAV GLPVDLNFSA
FNQSNTPRLQ GSVWRIGADR IQPPPTSPPY YPLTVAIDLD PTELAIRPGM AVDVFIRTGE
RSLLSYLFKP FTDRLHLALA EE
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