Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A3882 |
Symbol | malK1 |
ID | 5802360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 4116945 |
End bp | 4118045 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641341674 |
Product | sugar transport ATP-binding protein |
Protein accession | YP_001608184 |
Protein GI | 162420417 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.151408 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAGCA TTAGACTGAG AAACGTGACC AAACGTTTTG GCAAAACCGA AACACTCCAT AACATCAACC TTGATATTGA AGATGGGGAA TTTGCTGTCT TCGTTGGCCC TTCCGGCTGC GGGAAATCAA CACTACTAAG GATGATTGCC GGGCTTGAAG AGATAAGTGA TGGTGAGGTT TTGATTGACG ATGAGGTGAT CAATGATGTC GCTCCCTCAC ATCGTGGCGT AGCGATGGTC TTCCAGTCCT ACGCGCTCTA CCCACACATG ACGGTAGCCG AAAACATGGG CTATGGTTTG AAAGTCAATA AGGTGCCTAA AGAGCAGATC CGTCATCAAA TAGAGATGGT GGCTAAAACC TTACAACTGT CCCATTTACT CGACAGAAAA CCAAAACAAC TCTCCGGTGG GCAGCGTCAG CGCGTCGCCA TTGGCCGTGC CATTGTGCGC AACCCGAAAG TGTTCATGTT TGATGAACCG CTTTCCAACC TTGACGCCGA ACTCCGTGTC GAAATGCGTC TGCACATCGC AAAACTTCAT CAGGAAATGA AGACCACCAT GGTGTATGTC ACCCATGACC AAGTGGAAGC GATGACATTA GCCGATAAGA TTGTGGTGAT GAACTACGGC AAGATTGAGC AAATGGGCTC ACCAATGTCG CTCTATTACA ACCCGGTGAA TAAATTTGTT GCTGGTTTTA TCGGTTCGCC AAAGATGAAT TTTCTGCCCG CGACCGTGGA AAGCTGGCAG CCTGATTCCG TGACCGTCGC CGAAGGCCAT AGCCTGACAT TGGCATTGCA CACCTCACCA CTACAGGCCG GTGATCCCGT CACTATTGGG ATACGTCCAG AACATCTCAG CGTGGCTGAT AGCACAGTGC AAACATTAGA TTTTCATTGC GAAGTGGTAG AACGACTGGG GAATAACACC TATCTGTTTG GTCAGTGCCA CGGTCACGAT GGCTTCAAAA TGCTGTTAGC AGGAGATGTC CATTTCCGCC CTTATCAGAA GCTAAATCTG AGTTTTGATG CTGGATATTG CATGGTGTTT AACGCTGATG GGTTACGCAT AAATGCAGAG ATTCCGGTGC CTCATGAATA A
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Protein sequence | MSSIRLRNVT KRFGKTETLH NINLDIEDGE FAVFVGPSGC GKSTLLRMIA GLEEISDGEV LIDDEVINDV APSHRGVAMV FQSYALYPHM TVAENMGYGL KVNKVPKEQI RHQIEMVAKT LQLSHLLDRK PKQLSGGQRQ RVAIGRAIVR NPKVFMFDEP LSNLDAELRV EMRLHIAKLH QEMKTTMVYV THDQVEAMTL ADKIVVMNYG KIEQMGSPMS LYYNPVNKFV AGFIGSPKMN FLPATVESWQ PDSVTVAEGH SLTLALHTSP LQAGDPVTIG IRPEHLSVAD STVQTLDFHC EVVERLGNNT YLFGQCHGHD GFKMLLAGDV HFRPYQKLNL SFDAGYCMVF NADGLRINAE IPVPHE
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