| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A3847 |
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| Symbol | xerD |
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| ID | 5802325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010159 |
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| Strand | + |
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| Start bp | 4083660 |
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| End bp | 4084559 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641341643 |
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| Product | site-specific tyrosine recombinase XerD |
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| Protein accession | YP_001608154 |
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| Protein GI | 162418404 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.349121 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAGC AAGATAACCC GCTGATTGAA CAATTTCTTG ATGCTCTGTG GCTGGAACGA
AATCTGGCAG AGAATACACT GGCGTCATAC CGTTTGGATT TACATGCGCT GGTTGGATGG
TTGACACACC ATAACAGTGA TTTATTGCGC GCCAGCCCGC AGGACTTGCA ATCCTTCCTT
GCTGAACGGA TCGAGGGTGG CTATAAAGCC ACCAGCTCGG CTCGTTTACT CAGTGCGATG
CGCCGGTTAT TTCAATATTT ATACCGGGAG AAACTGCGTG AGGATGATCC GACTGCGCTG
CTCTCTTCAC CCAAATTACC GCAGCGCTTG CCGAAGGATT TAAGTGAGGC ACAGGTCGAT
GCGTTACTTA ACTCGCCCAA TGTGGACATT CCCTTGGAAC TGCGCGATAA AGCAATGCTG
GAAGTGCTCT ATGCCACCGG CTTGCGGGTG TCAGAATTGG TCGGGCTGAC CATCAGTGAT
GTTAGTCTAC GCCAAGGTGT GGTGAGAGTG ATTGGTAAAG GGAATAAAGA GCGCTTGGTC
CCCTTGGGGG AAGAAGCTGT GTATTGGATT GAGAACTATA TGGAGCATGG CCGGCCTTGG
TTGGTTAATG GCGCATCGCT GGATGTATTG TTCCCCAGTA ACCGTAGCCA GCAAATGACC
CGTCAGACTT TCTGGCATCG CATCAAACAC TATGCGATCC TTGCCGGTAT TGATAGTGAA
AGGCTTTCAC CCCATGTGCT ACGCCATGCC TTTGCCACGC ATCTGCTGAA TCACGGTGCC
GATTTACGTG TAGTGCAAAT GTTACTGGGC CACAGTGATC TGTCGACAAC TCAGATTTAT
ACGCATGTAG CGACTGAACG TTTGAGACAG CTACATCAAC AGCATCATCC ACGCGCTTAA
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| Protein sequence | MKQQDNPLIE QFLDALWLER NLAENTLASY RLDLHALVGW LTHHNSDLLR ASPQDLQSFL
AERIEGGYKA TSSARLLSAM RRLFQYLYRE KLREDDPTAL LSSPKLPQRL PKDLSEAQVD
ALLNSPNVDI PLELRDKAML EVLYATGLRV SELVGLTISD VSLRQGVVRV IGKGNKERLV
PLGEEAVYWI ENYMEHGRPW LVNGASLDVL FPSNRSQQMT RQTFWHRIKH YAILAGIDSE
RLSPHVLRHA FATHLLNHGA DLRVVQMLLG HSDLSTTQIY THVATERLRQ LHQQHHPRA
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