| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A3798 |
|---|
| Symbol | |
|---|
| ID | 5802275 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | + |
|---|
| Start bp | 4031006 |
|---|
| End bp | 4031968 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641341595 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001608107 |
|---|
| Protein GI | 162418584 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1171] Threonine dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATACGT TGTTTGATGC CATCAGAGAG GCCCACCAGA TATTACGCCC ACAAGTGAGA
GTCACGCCGT TGGAGCATAG CCCACTGCTA TCTCAACACA GCGGTTGTGA GATCTATCTT
AAATGTGAGC ACCTGCAGCA CACCGGTTCT TTTAAATTTC GTGGGGCCAG TAACAAGTTA
CGTTTACTCA ATGAGGCACA ACGCCAGCAA GGTGTGATCA CCGCCTCCAC CGGTAACCAT
GGGCAAGGTG TGGCGCTGGC CGCAAAACTG GCGGGGATTA AATCCACTAT TTACGCCCCA
GAACAGGCGG CAGCCATCAA GCTGGATGTG ATCCGTGCAC TGGGGGGGCA AATTGAATTA
GTCTCCGGAG ATGCCTTAAA TGCTGAACTG GCCGCCGGTA TCGCCGCTGA GCAACAAGGT
AAAGTGTATA TCTCACCGTA TAACGACCCG CAGGTCATTG CCGGGCAAGG CACCTGTGGC
ATGGAGATGG TCGAACAGCA GCCCGATCTT GATGCGGTGT TTGTTGCCGT TGGTGGTGGT
GGCCTGATTT CAGGTATTGC GACCGTATTG AAAACATTAT CGGATAAAAC GCAGGTGATT
GGTTGCTGGC CAGCCAATGC CACCAGCCTG TATACCTGTC TGGAGAAAGG ACAGATTCAG
GAGGTGGCAG AGCAAGAAAC GCTGTCTGAC GGAACCGCCG GTGGTATCGA ACCGGGAGCG
ATCACCTTTG CACTGTGCCA ACAGTTAATC GATCAGAAGG TGCTGGTGAG TGAGCAAGAA
ATCAAAGAGG CCATGGGTTT GATTGCCCGT ACTGACCGCT GGATGATTGA AGGTGCCGCC
GGTGTGGCAC TGGCTGCGGC ACTGAAATTG GCTCCGCAAT GGCAAGGTAA GAAAGTGGCG
GTGGTGTTGT GCGGTAAAAA TATCGTGCTG GAGAAATATC TGGGAGCTGT CAGCGGATGC
TAA
|
|---|
| Protein sequence | MNTLFDAIRE AHQILRPQVR VTPLEHSPLL SQHSGCEIYL KCEHLQHTGS FKFRGASNKL
RLLNEAQRQQ GVITASTGNH GQGVALAAKL AGIKSTIYAP EQAAAIKLDV IRALGGQIEL
VSGDALNAEL AAGIAAEQQG KVYISPYNDP QVIAGQGTCG MEMVEQQPDL DAVFVAVGGG
GLISGIATVL KTLSDKTQVI GCWPANATSL YTCLEKGQIQ EVAEQETLSD GTAGGIEPGA
ITFALCQQLI DQKVLVSEQE IKEAMGLIAR TDRWMIEGAA GVALAAALKL APQWQGKKVA
VVLCGKNIVL EKYLGAVSGC
|
|---|
| |