Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A3793 |
Symbol | |
ID | 5802270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 4026248 |
End bp | 4027906 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641341591 |
Product | hypothetical protein |
Protein accession | YP_001608103 |
Protein GI | 162419543 |
COG category | [R] General function prediction only |
COG ID | [COG2985] Predicted permease |
TIGRFAM ID | [TIGR01625] AspT/YidE/YbjL antiporter duplication domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.212534 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTGCTA TCGCCCTTAC CGTCAGTATG TTGGCGCTGG TCGCCGTATT GGGGTTATGG ATCGGTAATT GGAAAATCTA TGGTGTGGGG TTAGGTATCG GTGGGGTGCT ATTTGGCGGC ATTATTGTGG GCCATTTTGC ACAAACTTAT CAGATCGTTC TTAACGGAGA TATGCTGCAT TTTATTCAAG AGTTCGGCCT GATTCTGTTT GTGTATACCA TCGGTATTCA AGTTGGGCCG GGGTTCTTCT CTTCACTACG GGTATCGGGG TTGCGGCTTA ACTGCTTCGC CATCTTGATG GTGGTTGTGG GCGGGTTAGT AACAGCGATT ATTCATAAGC TGTTTGCTGT GCCGCTGCCG ATTATTCTGG GGGTGTTTTC TGGTGCGGTA ACCAATACAC CGGCACTTGG TGCGGCTCAG CAAATTCTTA CCGATTTAGG TTCGCCGCCA CAACTGGTCA GTCAAATGGG GATGGGTTAC GCCATGGCGT ATCCATTTGG TATTTGTGGC ATTTTACTGG TGATGTGGCT GATTCGTTTA TTCTTTAAAA TCAATATCGA TCGTGAAGCG AAAGCGTTCG ACAGCAGCTA CGGGCAAAAC CGCGAGTTGC TGCAAACCAT GAACGTTGCG GTGCGTAACC CCAATCTACA TGGTTTATCG GTACAGGATG TGCCATTGCT GAACAGCGAT GAGGTGGTCT GTTCACGATT GAAGCGTGGC GATTTACTGA TGGTGCCCAT GCCAGCCACG GTGATTGAAA TTGGGGATTA TCTGCATTTG GTCGGGCAAC GGGATGCGCT GGAGAAAGTG CGGCTGGTTG TGGGTGAAGA GGTCGATGTG ACATTATCCA CGGCAGGAAC GGCGTTGCAA ACGGCTCGAG TGGTAGTGAC CAACGAGGCG GTACTGGGTA AAAAAATCCG CGATCTTAAT CTAAAACAGA AGTATGACGT GGTGATTACT CGTCTTAATC GCGCGGGTAT CGAGCTGGTC GCCAGCAACA GTGCCAGCTT GCAATTCGGC GATATCCTGA ATTTAGTGGG CCGTCCTGAA GCTATCGAAG CGGTGTCCGC GATTGTGGGG AACGCGCAGC AAAAATTGCA ACAGGTGCAG ATGTTACCGG TATTTATCGG TGTCGGTCTC GGGGTTTTAC TGGGGTCGAT ACCGCTGTTT GTTCCAGGGT TTCCGGCGGC ATTACGTTTA GGGCTAGCGG GTGGTCCGCT AGTGGTGGCG TTGATCCTCG GACGGATTGG TAGCATTGGT AAGCTGTATT GGTTTATGCC ACCGAGTGCT AACCTGGCCT TGCGTGAATT GGGGATAGTG CTGTTTTTGT CAGTGGTCGG ATTGAAATCC GGCGGTGATT TTATCAATAC GCTGGTCAAT GGTGATGGGC TGGCATGGAT TGGTTATGGT GCGATGATCA CCGGGATACC GTTGCTAACG GTAGGCATTT TGGCACGTAT GCTGGTCAAA ATGAACTACC TGACGCTATG TGGCATGTTA GCGGGTTCGA TGACGGATCC ACCTGCGCTG GCCTTTGCCA ATGGCCTGCA CCCGACCAGC GGTGCGGCGG CGTTGTCTTA TGCGACAGTG TACCCGCTGG CGATGTTTCT ACGAATCATG TCACCACAGA TATTGGCGGT ATTGTTCTGG ACGTTGTAG
|
Protein sequence | MSAIALTVSM LALVAVLGLW IGNWKIYGVG LGIGGVLFGG IIVGHFAQTY QIVLNGDMLH FIQEFGLILF VYTIGIQVGP GFFSSLRVSG LRLNCFAILM VVVGGLVTAI IHKLFAVPLP IILGVFSGAV TNTPALGAAQ QILTDLGSPP QLVSQMGMGY AMAYPFGICG ILLVMWLIRL FFKINIDREA KAFDSSYGQN RELLQTMNVA VRNPNLHGLS VQDVPLLNSD EVVCSRLKRG DLLMVPMPAT VIEIGDYLHL VGQRDALEKV RLVVGEEVDV TLSTAGTALQ TARVVVTNEA VLGKKIRDLN LKQKYDVVIT RLNRAGIELV ASNSASLQFG DILNLVGRPE AIEAVSAIVG NAQQKLQQVQ MLPVFIGVGL GVLLGSIPLF VPGFPAALRL GLAGGPLVVA LILGRIGSIG KLYWFMPPSA NLALRELGIV LFLSVVGLKS GGDFINTLVN GDGLAWIGYG AMITGIPLLT VGILARMLVK MNYLTLCGML AGSMTDPPAL AFANGLHPTS GAAALSYATV YPLAMFLRIM SPQILAVLFW TL
|
| |