Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A3760 |
Symbol | mdfA |
ID | 5802237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 3988387 |
End bp | 3989547 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641341561 |
Product | multidrug translocase |
Protein accession | YP_001608073 |
Protein GI | 162418215 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTTCGAAT TTGCAGCGTA TATCGCCAAC GATATGATCC AGCCAGGTAT GCTGGCAGTG GTCGCCGAGT TTAATGCCAG TGTTGAGTGG GTTCCAACCT CTATGACCGC TTATCTGGCG GGGGGGATGT TCCTACAATG GCTTCTAGGG CCGTTGTCTG ACCGCCGTGG GCGTCGTCCA GTGATGTTGG CTGGGGTCGC TTTCTTTGTC GTGACTTGCC TTGCCATTTT ACTGGTTAAT AGCATTGAAC AGTTCATCGC AATGCGCTTC TTGCAAGGCA TTGGCTTGTG CTTTATCGGT GCCGTCGGTT ACGCCACTAT TCAGGAATCT TTTGAAGAAG CGGTCTGTAT TAAAATCACC GCGTTAATGG CCAATGTGGC ATTGATTGCT CCGTTGCTTG GCCCATTGGC CGGTGCTGCC CTGATCCATG TGGCTCCTTG GCAAACCATG TTCGTCTTGT TTGCGGTGCT GGGGGCAATT TCATTTGCCG GCCTGTGGCG TGCGATGCCA GAAACTGCCT CGCTGAAAGG GGAGAAACTG TCAGTTGCCA ACATGTGGCG TGATTATAAG CAAGTACTTG CTAACCGCCG CTTCCTCTGT GGTTCTTTAG CATTGGGCTT TGCCAGCCTG CCTTTGCTGG CATGGATTGC CCAGTCACCG GTAATTTTGA TCAGCGGAGA GCAACTCTCT ACTTTTGAAT ATGGCATTTT GCAGGTACCA ATTTTCGGCG CACTGATTAT AGGTAACCTG ACACTGGCAC GATTGAGCGG TAAAACCAGC ATTCCTCAAC TCATCCGTTA CGGCGCTGGC CCAATGATTG TTGGCCTGAT GATCGCCGCC GGTTCAACAC TCTATTCATC CCATGCCTAT CTGTGGATGA CCGCCGGGTT GAGCCTGTAT GCTTTTGGTA TCGGTCTGGC GAACGCCGGT CTGGTGCGGT TGACACTATT CGCCAGTGAT ATCAGTAAAG GAACCGTCTC TGCGGCCATG GGGATGATCA GCATGATGAT CTTCACCTTA GGTATTGAGT TGGCCAAAGT GGCTTACCTG TGGGGCGACA GTAGAGGGTT TAATCTGTTT AACCTGATGA GCGGTTTACT GTGGCTAGGC TTGGTGATGG TGTTCATCCG CCGCCAACCC GAGGCGGTTG CTACCGAGTA A
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Protein sequence | MFEFAAYIAN DMIQPGMLAV VAEFNASVEW VPTSMTAYLA GGMFLQWLLG PLSDRRGRRP VMLAGVAFFV VTCLAILLVN SIEQFIAMRF LQGIGLCFIG AVGYATIQES FEEAVCIKIT ALMANVALIA PLLGPLAGAA LIHVAPWQTM FVLFAVLGAI SFAGLWRAMP ETASLKGEKL SVANMWRDYK QVLANRRFLC GSLALGFASL PLLAWIAQSP VILISGEQLS TFEYGILQVP IFGALIIGNL TLARLSGKTS IPQLIRYGAG PMIVGLMIAA GSTLYSSHAY LWMTAGLSLY AFGIGLANAG LVRLTLFASD ISKGTVSAAM GMISMMIFTL GIELAKVAYL WGDSRGFNLF NLMSGLLWLG LVMVFIRRQP EAVATE
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