Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A3723 |
Symbol | rpe |
ID | 5802200 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 3945014 |
End bp | 3945691 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641341527 |
Product | ribulose-phosphate 3-epimerase |
Protein accession | YP_001608039 |
Protein GI | 162419892 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00616256 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGT ATTTAATTGC CCCCTCTATT CTGTCAGCTG ATTTTGCCCG GCTGGGTGAA GATACCGCGA AGGTACTCGC CGCAGGTGCT GATATTGTGC ATTTTGACGT GATGGACAAC CACTATGTTC CTAACCTGAC CATCGGGCCG ATGGTGTGCA AGGCTCTGCG TGATTACGGG ATCACCGCAC CTATTGATGT GCATCTGATG GTTAAACCGG TTGACCGTAT CGTCCCGGAT TTCGCCAAAG CCGGTGCAAC CTATATTACA TTCCATCCCG AAGCTTCTGA ACACGTTGAC CGCACGCTGC AATTGATCAA AGAGAGTGGT TGTAAGGCCG GTCTGGTGTT CAACCCAGCG ACTCCCCTGA GCTATCTTGA CTATGTGATG GATAAGCTGG ATGTCATTTT GCTGATGTCA GTTAACCCCG GTTTCGGTGG TCAATCGTTT ATTCCTGAAA CCCTGAATAA GCTGCGTCAG GTGCGTAAGT TGATTGATGA CAGCGGTTAT GACATCCGTT TGGAAGTGGA CGGCGGTGTT AAGGTTGAGA ATATTCGCCA AATAGCCGCA GCAGGTGCCG ATATGTTTGT TGCTGGCTCC GCGATTTTCA ATCAACCCGA TTATGCTGCG GTGATCGATG CCATGCGCAA TGAACTGGCG ATGGCGGCTA ATGGTTAA
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Protein sequence | MKKYLIAPSI LSADFARLGE DTAKVLAAGA DIVHFDVMDN HYVPNLTIGP MVCKALRDYG ITAPIDVHLM VKPVDRIVPD FAKAGATYIT FHPEASEHVD RTLQLIKESG CKAGLVFNPA TPLSYLDYVM DKLDVILLMS VNPGFGGQSF IPETLNKLRQ VRKLIDDSGY DIRLEVDGGV KVENIRQIAA AGADMFVAGS AIFNQPDYAA VIDAMRNELA MAANG
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