| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A3685 |
|---|
| Symbol | slyD |
|---|
| ID | 5802162 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | - |
|---|
| Start bp | 3905777 |
|---|
| End bp | 3906358 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641341492 |
|---|
| Product | FKBP-type peptidyl-prolyl cis-trans isomerase |
|---|
| Protein accession | YP_001608004 |
|---|
| Protein GI | 162420818 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.421055 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 58 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTAA CAAAAGACTT GGTAGTCAGC CTGGCTTACC AGGTACGTAC AGAAGACGGT
GTTTTAGTTG ATGAGTCTCC GGTGAGCGCG CCGTTGGACT ACCTGCACGG GCACGGTTCC
CTGATCGCTG GTTTAGAAAA CGCGCTCGAA GGCCACGAAG CTGGTGACAG TTTTGATGTG
CGTGTTAATG CCGATGAAGG TTACGGCAGC TACGATGAAA ATCTGGTGCA GCGTGTACCA
AAAGACGTCT TTATGGGCGT TGACGAGCTG GAAGTGGGGA TGCGTTTTCT GGCAGATACT
GATCAAGGCC CAGTACCGGT TGAGATCACT GCTGTCGAAG ACGAGCACGT CGTGGTTGAT
GGTAACCACA TGCTGGCGGG CCAGGATCTG AACTTCCACG TTGAAGTGGT TGCTGTCCGT
GAAGCAACAG AAGAAGAGTT GCAGCACGGC CATGTACATG GTGAGCATGA TCATCACCAT
GAACACGGTG ACGGTTGCTG CGGTGGTCAC GGCCACGACG ACCATGAACA TGAGCATGGT
AAAGGTGGTT GCGGTAAAAG TGGCGGTTGT GGCTGTCACT AA
|
|---|
| Protein sequence | MKVTKDLVVS LAYQVRTEDG VLVDESPVSA PLDYLHGHGS LIAGLENALE GHEAGDSFDV
RVNADEGYGS YDENLVQRVP KDVFMGVDEL EVGMRFLADT DQGPVPVEIT AVEDEHVVVD
GNHMLAGQDL NFHVEVVAVR EATEEELQHG HVHGEHDHHH EHGDGCCGGH GHDDHEHEHG
KGGCGKSGGC GCH
|
|---|
| |