| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A3636 |
|---|
| Symbol | tatC |
|---|
| ID | 5802113 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | - |
|---|
| Start bp | 3858037 |
|---|
| End bp | 3858813 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641341447 |
|---|
| Product | twin-arginine protein translocation system subunit TatC |
|---|
| Protein accession | YP_001607959 |
|---|
| Protein GI | 162420363 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
|---|
| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGTTG ATGATACCCA ACCCCTTATC TCTCATCTGA TAGAACTGCG TAAGCGGTTA
CTGAATTGTA TAATCACCAT TTTGGTGGTT TTTCTGGTAT TGGTCTTTTT TGCTAATGAT
ATCTATAACT TGGTATCAGC GCCGTTGATC AAACAGCTGC CTGCCGGTGC CAGTATGATT
GCAACGGATG TGGCATCACC GTTTTTCACC CCCATCAAGC TGACCATGAT GGTTTCGGTG
TTTGTTTCCG CACCGATGAC TCTTTATCAG GTTTGGGCAT TTATCGCTCC TGCATTATAT
AAGCATGAAC GCCGTTTGAT GGTGCCGTTA TTGATATCCA GTAGCCTTTT ATTCTATCTT
GGGATGGCAT TCGCATACTT TGTCGTTTTC CCATTGGCTT TTGGCTTTTT TGCCAAAACA
GCGCCAGAAA GCGTACTGAT AGCGACAGAT ATCACCAAAT ACCTCGATTT TGTCATGGCG
CTCTTTATGG CCTTTGGTAT TTCTTTCGAA GTTCCGATCG CGATCATTCT CTTGTGTTGG
GCGGGTGTAA CAACACCAGA AGCATTGAAG AAAAAGCGGC CTTATGTGTT TGTCGGCGCT
TTTGTTGTGG GGATGCTCCT GACACCTCCA GATGTGCTGT CCCAAACACT GCTGGCTATT
CCGATGTATC TGTTATTTGA AGTTGGTGTG TTCTTTGCCC GTTTTTATAC CGGTAAACAG
CGCCGTGCAG CTACTGAAGA AGATGAAGGT ATAGATAGCC ATCCGAAAGC ACCTTAA
|
|---|
| Protein sequence | MAVDDTQPLI SHLIELRKRL LNCIITILVV FLVLVFFAND IYNLVSAPLI KQLPAGASMI
ATDVASPFFT PIKLTMMVSV FVSAPMTLYQ VWAFIAPALY KHERRLMVPL LISSSLLFYL
GMAFAYFVVF PLAFGFFAKT APESVLIATD ITKYLDFVMA LFMAFGISFE VPIAIILLCW
AGVTTPEALK KKRPYVFVGA FVVGMLLTPP DVLSQTLLAI PMYLLFEVGV FFARFYTGKQ
RRAATEEDEG IDSHPKAP
|
|---|
| |