| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A3609 |
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| Symbol | lepA |
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| ID | 5802085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010159 |
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| Strand | + |
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| Start bp | 3828172 |
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| End bp | 3829971 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641341420 |
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| Product | GTP-binding protein LepA |
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| Protein accession | YP_001607933 |
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| Protein GI | 162420712 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0481] Membrane GTPase LepA |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01393] GTP-binding protein LepA |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00763266 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCACA TAAGAAACTT TTCTATTATT GCCCATATTG ACCACGGTAA GTCGACGCTG
TCTGATCGGA TTATTCAGAT CTGTGGCGGT TTATCTGAGC GTGAAATGGC CGCACAGGTA
CTGGATTCCA TGGATCTAGA ACGTGAGCGT GGTATTACCA TCAAGGCACA GAGTGTGACG
CTTGATTACC ATTCGAAGGA TGGTCAAACC TATCAACTTA ACTTTATCGA TACCCCCGGC
CATGTTGACT TCTCTTATGA AGTTTCACGC TCTTTAGCCG CGTGTGAAGG GGCTCTATTG
GTTGTGGATG CAGGGCAAGG CGTTGAGGCT CAGACGCTAG CAAACTGCTA CACCGCGATG
GAGATGGACC TGGAAGTTGT TCCGGTTCTG AACAAAATTG ATTTGCCTGC TGCCGATCCT
GAGCGGGTTG CTGAAGAAAT CGAAGACATT GTGGGGATTG ATGCCACTGA TGCGATTCGT
TGCTCGGCAA AAACCGGTGT GGGCGTGCCT GATGTTCTTG AGCGGTTGGT CCGCGATATT
CCAGCCCCTG AGGGGGATCC AAATGGGCCA TTGCAGGCAT TGATTATCGA TTCCTGGTTT
GATAACTACC TGGGTGTTGT GTCATTAATA CGTATCAAGA ATGGTTCGTT GCGTAAAGGC
GATAAAGTTA AGGTTATGAG TACCGGCCAG AGCTATAACG CGGATCGTTT AGGGATATTT
ACACCAAAAC GTGTTGATCG TGATGTTCTG AACTGCGGCG AAGTAGGCTG GTTGGTTTGT
GCAATAAAAG ACATTCTTGG CGCACCTGTT GGCGATACAT TGACATTAAC GCGTAACCCG
GCAGAAAAAT CATTGCCTGG CTTTAAGAAA GTAAAACCAC AAGTTTATGC GGGCCTGTTC
CCGATAAGCT CTGATGATTA TGAATCTTTC CGGGATGCGT TAGGTAAGTT AAGTCTTAAC
GATGCCTCTT TGTTCTATGA ACCAGAAAGC TCTACAGCAT TAGGCTTTGG TTTCCGATGC
GGCTTCCTTG GCTTGTTACA TATGGAGATC ATCCAGGAGC GTCTGGAGCG TGAATATGAT
CTGGAACTGA TTACTACGGC ACCAACAGTG GTGTACGAGG TGATTACGAC TAATCAGGAA
ACGGTCTATG TCGATAGCCC TTCTAAACTG CCTGCGTTGA ACAATATTGA AGAACTGCGC
GAACCGATCG CTGAATGCCA TATGTTGTTG CCACAGGAAT ACCTCGGTAA CGTCATTACA
TTGTGTATCG AAAAACGTGG TACACAGACC AATATGGTTT ATCACGGTAA GCAAGTCGCG
CTGACATATG AAATTCCAAT GGCGGAAGTC GTGCTTGATT TCTTTGATCG TTTGAAATCA
ACGTCACGGG GTTATGCTTC ACTGGATTAT AATTTCAAAC GCTTCCAGAC GTCTGACATG
GTACGTGTTG ATGTATTAAT CAATAACGAA CGTGTGGATG CGCTGGCACT GATCACGCAT
CGTGATAATG CACAATATCG TGGCCGTGAT TTGGTTGAGA AAATGAAAGA ACTGATCCCA
CGTCAACAAT TTGATATTGC GATCCAGGCT GCGATTGGTA ACCACATCAT TGCTCGCTCA
ACGGTAAAAC AGCTACGTAA AAACGTATTG GCGAAGTGTT ATGGTGGGGA TGTTAGCCGT
AAGAAAAAAC TTCTGCAGAA ACAAAAAGAC GGTAAGAAAC GTATGAAGCA AGTCGGTAAC
GTTGAATTAC CACAAGAGGC CTTCCTGGCT ATTCTGCATG TTGGAAAAGA CAGTAAATAA
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| Protein sequence | MKHIRNFSII AHIDHGKSTL SDRIIQICGG LSEREMAAQV LDSMDLERER GITIKAQSVT
LDYHSKDGQT YQLNFIDTPG HVDFSYEVSR SLAACEGALL VVDAGQGVEA QTLANCYTAM
EMDLEVVPVL NKIDLPAADP ERVAEEIEDI VGIDATDAIR CSAKTGVGVP DVLERLVRDI
PAPEGDPNGP LQALIIDSWF DNYLGVVSLI RIKNGSLRKG DKVKVMSTGQ SYNADRLGIF
TPKRVDRDVL NCGEVGWLVC AIKDILGAPV GDTLTLTRNP AEKSLPGFKK VKPQVYAGLF
PISSDDYESF RDALGKLSLN DASLFYEPES STALGFGFRC GFLGLLHMEI IQERLEREYD
LELITTAPTV VYEVITTNQE TVYVDSPSKL PALNNIEELR EPIAECHMLL PQEYLGNVIT
LCIEKRGTQT NMVYHGKQVA LTYEIPMAEV VLDFFDRLKS TSRGYASLDY NFKRFQTSDM
VRVDVLINNE RVDALALITH RDNAQYRGRD LVEKMKELIP RQQFDIAIQA AIGNHIIARS
TVKQLRKNVL AKCYGGDVSR KKKLLQKQKD GKKRMKQVGN VELPQEAFLA ILHVGKDSK
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