Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A3438 |
Symbol | dapD |
ID | 5801915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 3657361 |
End bp | 3658185 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641341257 |
Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
Protein accession | YP_001607774 |
Protein GI | 162418585 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCAAC TACAAAACGT TATTGAAACC GCCTTCGAGC GCCGTGCTGA CATTACGCCA GCGAATGTAG ACACCGTAAC GCGCGAAGCG ATTACCCATG TGATCGATTT ACTGGACACC GGCGCGCTGC GCGTCGCAGA AAAAATTGAT GGTCAGTGGG TGACGCATCA GTGGCTGAAA AAAGCGGTAC TGCTTTCTTT CCGCATCAAT GACAATCAAG TAATGGAAGG CGCTGAAACC CGTTACTATG ACAAAGTACC CATGAAATTC GCAGGCTATG ATGAAGCGCG TTTCCAACGT GAAGGTTTCC GCGTTGTTCC ACCAGCAACC GTGCGTAAAG GCGCATTTAT TGCCCGCAAT ACGGTGTTGA TGCCTTCCTA TGTCAATATT GGTGCTTTTG TTGATGAGGG CACTATGGTC GATACTTGGG CCACCGTGGG TTCTTGCGCG CAAATCGGTA AAAACGTCCA TCTATCTGGT GGCGTTGGTA TTGGCGGCGT CTTGGAGCCA CTGCAAGCGA ACCCAACCAT TATCGAAGAT AACTGCTTCG TAGGCGCACG CTCAGAAGTG GTTGAAGGCG TTATCGTCGA AGAAGGTTCT GTTATCTCCA TGGGCGTGTT TATCGGTCAA AGCACCCGTA TTTATGATCG TGAAACTGGC GAAGTCCATT ATGGCCGAGT ACCAGCAGGT TCGGTTGTCG TCTCTGGCAA CTTGCCATCG AAAGATGGCA GCTATAGCTT GTACTGCGCA GTTATCGTGA AAAAAGTTGA CGCGAAAACT CGCAGTAAAG TCGGTATTAA TGAGTTATTA CGCACCATCG ACTAA
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Protein sequence | MQQLQNVIET AFERRADITP ANVDTVTREA ITHVIDLLDT GALRVAEKID GQWVTHQWLK KAVLLSFRIN DNQVMEGAET RYYDKVPMKF AGYDEARFQR EGFRVVPPAT VRKGAFIARN TVLMPSYVNI GAFVDEGTMV DTWATVGSCA QIGKNVHLSG GVGIGGVLEP LQANPTIIED NCFVGARSEV VEGVIVEEGS VISMGVFIGQ STRIYDRETG EVHYGRVPAG SVVVSGNLPS KDGSYSLYCA VIVKKVDAKT RSKVGINELL RTID
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