| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A3407 |
|---|
| Symbol | metQ |
|---|
| ID | 5801883 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | + |
|---|
| Start bp | 3624133 |
|---|
| End bp | 3624948 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641341226 |
|---|
| Product | DL-methionine transporter substrate-binding subunit |
|---|
| Protein accession | YP_001607744 |
|---|
| Protein GI | 162420910 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen |
|---|
| TIGRFAM ID | [TIGR00363] lipoprotein, YaeC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0430128 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTTAA AATTCAAATC TATCGCAGCA ATTAGTGCGC TGATTGGTAC CTTGACTTTG
GTGGGTTGCG GCCCGACGGA AAAAGCGCCA AACCATATTA AAGTTGGCGT TATTGTCGGT
GCAGAGCAAC AAGTTGCCGA AGTGGCTCAG AAAGTGGCTA AAGAAAAGTA CGGTCTGGAC
GTTGAACTGG TGACATTCAA TGACTATGTG TTACCAAACG AAGCACTGAG CAAAGGGGAT
ATCGACCTTA ACGCTTTCCA GCATAAACCT TATCTGGATC AGCAAATCAA AGACCGTGGC
TACAAACTGG TTTCTGTTGG CAACTCGTTC GTTTACCCCA TTGCCGGCTA TTCCAAGAAA
ATCAAGTCAC TGGATGAACT ACAACCTGGA TCTCAGGTCG CCCTACCAAA TGACCCTACT
AATTTGGGCC GTTCTCTGTT ATTGCTACAA AGCGTTGGTC TGATTAAGCT GAAAGACGGT
GTTGGCCTGC TGCCAACCGT ATTAGATGTG GTTGAGAACC CTAAAAATCT GAAACTGGTT
GAGTTGGAAG CACCTCAATT ACCACGTTCT TTGGATGACC AACAAATCGC TCTGGCGATT
ATCAATACCA CTTACGCTAG CCAAATTGGC CTGACACCAG CTAAAGATGG TCTGTTTGTG
GAAGATAAAG AATCACCGTA TGTGAATCTG ATTGTTGCCC GCGAAGACAA TAAAGATGCG
GAAAATGTGA AAAAATTTGT TCAGGCTTAC CAGTCTGACG AAGTTTATGA TGCAGCGAAT
AAAGCATTCA ACGGTGGCGC AGTAAAAGGC TGGTAA
|
|---|
| Protein sequence | MSLKFKSIAA ISALIGTLTL VGCGPTEKAP NHIKVGVIVG AEQQVAEVAQ KVAKEKYGLD
VELVTFNDYV LPNEALSKGD IDLNAFQHKP YLDQQIKDRG YKLVSVGNSF VYPIAGYSKK
IKSLDELQPG SQVALPNDPT NLGRSLLLLQ SVGLIKLKDG VGLLPTVLDV VENPKNLKLV
ELEAPQLPRS LDDQQIALAI INTTYASQIG LTPAKDGLFV EDKESPYVNL IVAREDNKDA
ENVKKFVQAY QSDEVYDAAN KAFNGGAVKG W
|
|---|
| |