| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A3383 |
|---|
| Symbol | yajC |
|---|
| ID | 5801860 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | - |
|---|
| Start bp | 3601270 |
|---|
| End bp | 3601605 |
|---|
| Gene Length | 336 bp |
|---|
| Protein Length | 111 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641341204 |
|---|
| Product | preprotein translocase subunit YajC |
|---|
| Protein accession | YP_001607726 |
|---|
| Protein GI | 162421415 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1862] Preprotein translocase subunit YajC |
|---|
| TIGRFAM ID | [TIGR00739] preprotein translocase, YajC subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.000227784 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 0.514524 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTTT TCATTTCTGA TGCTGTCGCA TCTGCAGGGG CTCCGGCTCA AGGAAACAGC
ATGACCTCCA TGCTGATCAT GCTGGTAGTA TTCGGTCTGA TTTTCTACTT TATGATCCTG
CGTCCACAAC AAAAACGTGC CAAAGAACAT AAAAAACTGA TGGATTCTAT TGGCAAAGGT
GATGAAGTAT TAACATCGGG TGGTTTTATT GGTCGTGTTA CTAAAGTTGC GGAAACAGGC
TATGTTGTTA TCGCGCTGAA TGACACTACC GAAGTGATGA TCAAGCGTGA CTTCGTGGCT
GCCGTGTTAC CGAAAGGTAC AATGAAGGCT CTGTAA
|
|---|
| Protein sequence | MSFFISDAVA SAGAPAQGNS MTSMLIMLVV FGLIFYFMIL RPQQKRAKEH KKLMDSIGKG
DEVLTSGGFI GRVTKVAETG YVVIALNDTT EVMIKRDFVA AVLPKGTMKA L
|
|---|
| |