Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A3381 |
Symbol | secF |
ID | 5801858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 3598416 |
End bp | 3599384 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641341202 |
Product | preprotein translocase subunit SecF |
Protein accession | YP_001607724 |
Protein GI | 162421217 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0341] Preprotein translocase subunit SecF |
TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family [TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0144101 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.396634 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCACAGG ATTATACTGT TGAACAACTA AACTATGGCC GTAAAGTCTA TGACTTTATG CGCTGGGATT ACGTTGCTTT CGGCGTTTCA CTGTTGTTGT TAGTCGCATC CATTGTGGTG ATGTCGACTA AGGGATTCAA CTGGGGTCTG GATTTCACCG GTGGTACGGT GATTGAAATT AATCTGGAAA ACCCTGCGGA TCTTGACCAA CTCCGTGACA CGTTGCAAAA CGCGGGTTTT GAATCGCCGA TACTGCAAAA CTTTGGTAGC TCTCGTGATG TCATGGTACG TATGCCACCT GCAACCGGCA CTGCCGGCCA GGAGCTGGGT AACAAAATCA TCTCGGTTAT CAATGAATCT GTTGATAAGA ATGCATCAGT AAAGCGTATC GAATTCGTTG GGCCTAGTGT GGGCAGTGAT TTAGCCCAAG CCGGTGCTCT GGCGCTTTTG GTCGCGTTAC TGTCTATTCT GGTTTACGTG GGTTTCCGTT TTGAATGGCG TCTGGCATTG GGGGCCGTTA TCTCATTAGC CCATGACGTG GTCATTACCA TGGGGATCTT GTCGTTGTTC CATATTGAGA TTGACCTGAC GATCATTGCT TCATTGATGT CGGTTATTGG TTACTCTCTG AACGATAGTA TCGTGGTATC AGACCGTATT CGTGAGAACT TCCGCAAAAT TCGTCGTGGA ACGCCTTACG AAATCATGAA TGTATCTCTG ACACAAACCT TAAGTCGTAC GATTATGACT TCTGCGACGA CTCTGATGGT TGTGTTGATG CTGTTTATCT TCGGTGGTGC GATGCTGCAA GGCTTCTCAT TAACGATGCT GATCGGTGTT ACTATCGGTA CCGTTTCATC TATCTACGTG GCGTCCGCGC TGGCGCTGAA GTTAGGGATG AAACGTGAAC ACATGTTGCA GCCGAAGGTT GAGAAAGAAG GTGCTGACCA ACCTTCAATA CTGCCGTGA
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Protein sequence | MAQDYTVEQL NYGRKVYDFM RWDYVAFGVS LLLLVASIVV MSTKGFNWGL DFTGGTVIEI NLENPADLDQ LRDTLQNAGF ESPILQNFGS SRDVMVRMPP ATGTAGQELG NKIISVINES VDKNASVKRI EFVGPSVGSD LAQAGALALL VALLSILVYV GFRFEWRLAL GAVISLAHDV VITMGILSLF HIEIDLTIIA SLMSVIGYSL NDSIVVSDRI RENFRKIRRG TPYEIMNVSL TQTLSRTIMT SATTLMVVLM LFIFGGAMLQ GFSLTMLIGV TIGTVSSIYV ASALALKLGM KREHMLQPKV EKEGADQPSI LP
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