Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A3349 |
Symbol | speA |
ID | 5801826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 3562269 |
End bp | 3564248 |
Gene Length | 1980 bp |
Protein Length | 659 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641341170 |
Product | arginine decarboxylase |
Protein accession | YP_001607692 |
Protein GI | 162420874 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1166] Arginine decarboxylase (spermidine biosynthesis) |
TIGRFAM ID | [TIGR01273] arginine decarboxylase, biosynthetic |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGATG ATAACTTGAT TAGCCGTCCG TTAACTGCGG GCGCACATGT TTCTTTACGC TCCATGCAGG AGGTAGCCAT GAATGATCGA AATGCCAGCA AGATGCTGAG CACGTATAAC GTCGCCTACT GGGGTGGCAA CTATTATGAC GTCAATGAAT TAGGTCATAT CAGTGTTTGC CCTGATCCGG ATATTCGTGA GGCGCGTGTC GATCTGGCGC AACTGGTTAA AAAGATGCAG CTCGAACAAG GGCAACGTTT GCCTGCGCTG TTCTGCTTCC CACAAATTTT ACAGCATCGT CTGCGTTCAA TTAACGCGGC GTTTAAACGT GCGCGTGAGT CTTTCGGCTA TGAAGGCGGC TACTTCCTGG TTTACCCCAT TAAAGTAAAC CAACACCGTC GAGTGATTGA GTCTTTGGTC AATTCCGGCG AACCGTTAGG GCTGGAAGCG GGTTCTAAAG CTGAGATGAT GGCGGTGCTG GCCCATGCTG GCATGACTCG TTCGGTTATC GTGTGTAACG GTTATAAAGA CCGTGAATAC ATTCGTTTGG CTTTGATCGG TGAAAAACTG GGCCATAAGG TGTATCTGGT CATCGAAAAG ATGTCAGAAA TCAAAATGGT CCTGGAAGAA GCCGAGCGGC TGAATGTGGT TCCACGTTTG GGGGTTCGCG CCCGCCTGGC ATCACAAGGT TCCGGTAAAT GGCAGGCCAG TGGGGGTGAG AAGTCCAAAT TTGGTTTGTC TGCAACGCAG GTATTACAAC TGGTTGATAT GCTGCGTGAG GCGAATAGCC TGGAAAGTTT GCAATTACTG CATTTCCACT TAGGTTCTCA ACTCTCCAAC ATCCGTGATA TCTCCACCGG CGTGCGTGAA TCTGCTCGTT TCTATGTGGA GTTACACAAG CTGGGCGTTA ATATCCAGTG CTTCGATGTG GGCGGGGGCT TGGGCGTCGA TTATGAAGGG ACGCGCTCTC AATCTGATTG CTCCGTTAAC TATGGCTTGA ATGAATATGC CAATAACGTT ATCTGGGGTA TCGGTGATGC CTGTAACGAA CATGGTTTGC CGCATCCTAC CGTTATTACA GAATCTGGTC GTGCGGTTAC CGCTCACCAT ACGGTATTGG TGTCCAATGT TATCGGTGTA GAGCGCAATG AGTTCTGTGA GCCGCAGCCA CCGGAAGCGG GCGCTCCACG TGCTTTGGAA AGTTTATGGG ATACCTGGCA GGAGATGCAG GAACCGGAAA ACCGCCGTTC ACTGCGCGAA TGGTTGCACG ATAGCCAAAT GGATTTACAC GACGTCCATA CCCAATATGC TCACGGTATG CTGGATCTGA CTCATCGCGC TTGGGCAGAG CAACTTTATC TAAGCATTTG TAATGAGATC CAAAAACAGT TGGATCCAAG CAACCGCGCC CACCGGCCCA TCATTGATGA GCTGCAAGAG CGGATGGCTG ACAAGCTGTA TGTGAATTTC TCGCTGTTCC AGTCAATGCC GGATGCATGG GGTATCGATC AACTGTTCCC GGTCTTGCCA TTGGAAGGGT TAGATAAGCC GCCAGAGCGC CGTGCGGTAT TGCTGGATAT TACCTGTGAT TCTGATGGCA CCATCGATCA CTATATTGAT GGTGATGGGG TGGCGACCAC CATGCCAATG CCACCGTATG ATCCGGAAAA CCCGCCATTG CTAGGCTTCT TTATGGTCGG TGCTTACCAG GAAATCTTGG GTAATATGCA CAACCTGTTT GGTGACACTG CGGCGGTAGA TGTTTATGTC TTCCCTGATG GCACGGTAGA GGTTGAGCAG ACCGATGAAG GCGATACAGT GGCGGATATG TTGGAATACG TCCAATTGAA CCCTGAAAAA TTGCTGGAAC ATTTCCGCGG TCAGGTAAAA GAAACCGATC TGGATACCGA ATTGCAGGCG CAGTTCCTGG AAGAGTTTGA GGCTGGCTTG TACGGCTACA CATATCTTGA AGACGAATAA
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Protein sequence | MSDDNLISRP LTAGAHVSLR SMQEVAMNDR NASKMLSTYN VAYWGGNYYD VNELGHISVC PDPDIREARV DLAQLVKKMQ LEQGQRLPAL FCFPQILQHR LRSINAAFKR ARESFGYEGG YFLVYPIKVN QHRRVIESLV NSGEPLGLEA GSKAEMMAVL AHAGMTRSVI VCNGYKDREY IRLALIGEKL GHKVYLVIEK MSEIKMVLEE AERLNVVPRL GVRARLASQG SGKWQASGGE KSKFGLSATQ VLQLVDMLRE ANSLESLQLL HFHLGSQLSN IRDISTGVRE SARFYVELHK LGVNIQCFDV GGGLGVDYEG TRSQSDCSVN YGLNEYANNV IWGIGDACNE HGLPHPTVIT ESGRAVTAHH TVLVSNVIGV ERNEFCEPQP PEAGAPRALE SLWDTWQEMQ EPENRRSLRE WLHDSQMDLH DVHTQYAHGM LDLTHRAWAE QLYLSICNEI QKQLDPSNRA HRPIIDELQE RMADKLYVNF SLFQSMPDAW GIDQLFPVLP LEGLDKPPER RAVLLDITCD SDGTIDHYID GDGVATTMPM PPYDPENPPL LGFFMVGAYQ EILGNMHNLF GDTAAVDVYV FPDGTVEVEQ TDEGDTVADM LEYVQLNPEK LLEHFRGQVK ETDLDTELQA QFLEEFEAGL YGYTYLEDE
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