Gene YpAngola_A3296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A3296 
Symbol 
ID5801773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp3501131 
End bp3501769 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content43% 
IMG OID641341120 
Producthypothetical protein 
Protein accessionYP_001607642 
Protein GI162420542 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.114197 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.0687983 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTTTTAT CCAAAAAACG GTCATTGCTT CACATTCTCT GGTCACTGGA TAGCACGGTA 
AAAAATCAAA ACCATGTCGT ATCCTATGAT CTCTCCGCTC AAATATTACA GGTTGTCATG
CAGGCCGCAG CAGATAAAAA ACTCACTAAT ATTGAGATAC AACAAGGGCT GGCTGAATCA
TTGCCTTTTG CTGATCAAAG CTTTGATATT GTTATCAGCC GTTATTCTGC ACACCATTGG
CACGATGTTG GGAAAGCTTT ACGTGAAGTT AAGCGGGTAT TACGGCCCGG TGGAAAAGTC
ATCTTCATGG ATGTGGTTTC TCCTGGACAT CCGGTATTGG ATATCTATTT GCAAACAGTA
GAAGTCTTAC GCGATACCTC TCATGTACGA AATTACTCTC CTGGAGAATG GCTATCTTTA
TTTACCGAGG GTGGGTTAGT AATAAATGAA GTGACTTCTG ACCGCTTGTA TTTGGAGTTC
AGCAGTTGGG TTGCCAGAAT GCGGACACCT GCACATTTTG CTACGGCTAT TCGCGAGTTT
CAAAAGTTAG CATCTGACGG TGTCATTAAT CACTATGCTA TTCAGGCTGA TGGTTCCTTT
ACCAGTGATA TCATGATGAT TGTGGCAGTA AGAGACTAG
 
Protein sequence
MLLSKKRSLL HILWSLDSTV KNQNHVVSYD LSAQILQVVM QAAADKKLTN IEIQQGLAES 
LPFADQSFDI VISRYSAHHW HDVGKALREV KRVLRPGGKV IFMDVVSPGH PVLDIYLQTV
EVLRDTSHVR NYSPGEWLSL FTEGGLVINE VTSDRLYLEF SSWVARMRTP AHFATAIREF
QKLASDGVIN HYAIQADGSF TSDIMMIVAV RD