Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A3231 |
Symbol | recB |
ID | 5801707 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 3421252 |
End bp | 3424914 |
Gene Length | 3663 bp |
Protein Length | 1220 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641341059 |
Product | exonuclease V subunit beta |
Protein accession | YP_001607582 |
Protein GI | 162420885 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
TIGRFAM ID | [TIGR00609] exodeoxyribonuclease V, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACCCA CGACTCCCCA GCGGCTTGAG CCGCTGGCGC TTCCCCTCTA TGGCGAGAGG CTGATAGAAG CCTCTGCCGG TACTGGTAAG ACATTTACCA TCGGGGTCCT TTATCTTAGA TTGTTGCTTG GGTTAGGGGG CGATGCTGCA TTCCGTCGCC CTTTGATGGT GGAGGAAATC CTAGTGGTGA CCTTTACTGA AGCCGCGACC GAAGAGCTCA GGGGGCGAAT TCGCGATAAT ATTCATGGGT TGCGTATCGC TTGCGTTCGG GGAGTCAGTG ATGACCCAAT GTACCAGGCT CTATTAGCCG AAATCACCGA TTGGGCCGTA GCCGCCGCGC AATTATTGGC GGCTGAGCGT CAGATGGATG AAGCCGCGAT TTACACTATT CATGGTTTCT GCCAAAGAAT GCTGGCAAAT AACGCTTTTG AATCCGGCAT TTTATTCGAA CAAACGTTAG TTCAGGATGA ACTCCCGTTA TGGCGGCAGG CCTGTGCTGA CTTCTGGCGG CGTCATTGTT ATCCGCTTCC CTTAGTCATC GCACGGGCGG TCAGTCAGGA GTGGAGCGGG CCGGAGGCAT TACTCAGTGA TCTGAGTGCT TATTTACAAG GTGAAACGCC AAAGTTTCGG CAAGCGCCCG GTGACGATGA AACGATCCTT AGCCGCCATC AGCACGTTGT GACACAGATT GATGCACTTA AAGCAGAGTG GCGCTTAGCC GCCCCTGAAT TAGAAGCATT AATTAGTCGT TCTGGCGTTG ATAAACGCAG TTATAGCAGC AAGCACTTAC CCAACTGGCT GGAAAAAGTA GGATTATGGG CGGAGCAGGA AACGGAAGAT TATCAATTAC CCAAAGAACT GGAAAAATTT CGCCAGTCGG TGTTATTGGA AAAGACCAAG AAGGGAGCCG CCCCACAACA TACTTTATTT AGTGCGATAG ACTCGATATT TGAACAGCCC CTAACGTTGA GGGATCTTAT TTTAGCCCGA GCCATCAGCG AAATACGGTT TTCTGTACAG CAGGAAAAAC GGCAGCGTGC AGAGCTGGGG TTTGATGATT TACTCAGTAA GTTAGATGCC GCATTACAAC AATCGGGGGG TGAGTTGCTC GCCCAATCTA TTCGTACCCG TTATCCCGTT GCAATGATTG ATGAATTTCA GGATACCGAC CCGCAACAAT ACCGCATTTT CCACACCGTT TATGGCGGGC AAGAAGCGTG CGCTTTACTG TTGATCGGTG ATCCTAAACA GGCTATTTAT GCTTTTCGTG GCGCAGATAT ATTTACCTAT ATTCGCGCCC GTTCAGAAGT AAGCGCCCAC TACACATTGG AAACCAACTG GCGCTCTTCT TTTCCCATGG TGCAATCAGT GAACAGGCTA TTTAGTCTGG TTAATACGCC TTTCTTATTT GAGCAAATCC CCTTTATTAA TGTCGCCGCC GCCAAAAAGA ATCATGATTT ATCCTTTGAA ATTAAAGGAG AAAAGCAACC TGCGCTACAT TTTTGGCTGC AACCCGGTGA CGGTGTTGGT GTAAGTGAGT ACCAACAAGT AATGGCTAGA CAATGTGCAG CGCAAATTCG TGATTGGTTG ACTGCCGGCC AGCAGGGGCA AGCAGAACTA CTGACCACGA AAGGACCAAA ACCGGTTCAG GCATCAGATA TAACCATACT GGTGCGTAGC CGGGCAGAGG CCGCATTGAT ACGTGATGCA CTTAGTGCGC TGGCGATCCC ATCGGTCTAT TTATCTAATC GTGACAGTGT CTTTGAGACT ACAGAAGCCA AAGATCTCTT GTGGTTACTG CAAGCCGTGT TAGCACCAGA GCAGGAGCGC GCACTACGTA GTGCTATGGC TACGGGGATC TTGGGGTTGG ATGCCAGAAT GTTGGATGCG TTAAATCACG ATGAGCGAGC TTGGGATGCG CTGGTCGATG AGTTTGATCA CTATCGCCAG CATTGGCAGC GCCGTGGGGT ATTACCCATG CTGCGGGAGA TGATGGCCCG CCGCCATTTA GCTGAAAACT TGTTGGCAAC ACCCGGTGGG GAGCGTCGGC TGACAGATTT ACTACATCTT GGGGAATTAC TGCAAGAGGC CGCCTCGCAA CTGGATAGTG AGCACGCACT AATTCGCTGG TTGGCCCAGC AAATTGCTCA ACCCAATCCC CAGTCAGATA GCCAACAATT ACGCTTGGAA AGTGATCGCC ATTTGGTTCG AGTGGTTACT ATCCATAAAT CGAAAGGGTT GGAATATCCA TTAGTTTGGC TGCCTTTTAT CGGTAATTTT CGGCAACAAC AGAATGTGCT TTACCATGAC CGACATAGCT TTGAGGCTTT ACTCGATCTT AATGCTGATG AAGAAAGCCA GGCTTTAGCT GAAGAAGAAC GTCTGGCTGA GGATTTACGG CTATTGTATG TCGCGTTGAC GCGTTCGGTT TATCATTGCA GCGTGGGCAT TGCACCGCTG ATTAAAGGGG GGAGGAAAAA GCAAGGCGAG AGTGATATGC ATCGCAGTGC GTTAGGTTAT TTGGTTCAGC ATGGTCAACC CGGTGATGCT CATGTTCTAA GCGAAAAGTT AACTGAGTTA GCGCGCTCAT CGAATGGTGA TATTTGCGTT TCGCCCGTTG AGCCTCCTGA TGATAAACCT TGGCAACCAC AGCCCGAAGC CTTGCCTGAA CTTACCGCCC GCCATTTTAC TCGAAAAATG CAAGATTATT GGCGCGTAAC CAGCTATTCA GGTTTACAGC AGTCTGGCTC TACAAAGAAG CTGTATGGTT CTGCAACAGG GGACGTATCG CAGGCTCTGG GGGCACCATT ACAGGTCTTG TTGCCACGGT TGGACATTGA TGCCGTAGGT GAGCAGGCGG TGGTGACAGA AGACGATCAT TTAACACCTC ATACCTTCCC TCGGGGAGCG GCCCCAGGGA CTTTCTTACA TGATTTGCTT GAGCCATTAG ATTTTAGTCA ACCGATTGAA TTGGCGTGGT TGTCTGAGCG GCTACAGCAA CAGGGTTTTA GCGAACAGTG GGCACCGGTG TTACACCAGT GGCTAAATGA TATAGTGCAA ACGCCGCTTA CCGATACCGG GGCCACTTTG GCTGGGTTGT CGCCAGAGCG CAAACAGGCC GAGCTACAAT TTTATCTACC CATCGATAGC CTGCTACGGG CCGAGGTATT AGACCGTTTA ATCAAACAGT ATGATCCACT TTCCCGGCAG TGCCCTGTAT TGGATTTTCA ACAGGTTAGA GGGATGCTCA AGGGGTTTAT TGACTTGGTT TTTTGCTGGC AGGGGCAATA TTACTTGCTG GATTACAAAT CCAATTGGTT GGGTGAGGAC AGTCGTGCTT ATACCGTTGA GGCGATGACA CAAGCGATGG CTGAACATCG CTATGATCTG CAATACCAAC TTTATACTTT GGCTTTACAC CGCTATTTAC GCCATCGTTT GGCCGATTAT GACTATCAAC GCCACTTTGG TGGGGTTATT TACCTCTTCT TGCGCGGCGT TGATCAGCAA CATTCAGGGC ACGGTATTTT TAATTGCCGG CCTGAACAGA AACTGATTGA AGAAATGGAT CGCTTATTCA GTGGCACAAT TGGCAGTAAC GCAACCGCGA GTGACAAAAG CGGTAGCAAT GTCATTCACA GCGGCGAGAG GGCATCACGA TGA
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Protein sequence | MTPTTPQRLE PLALPLYGER LIEASAGTGK TFTIGVLYLR LLLGLGGDAA FRRPLMVEEI LVVTFTEAAT EELRGRIRDN IHGLRIACVR GVSDDPMYQA LLAEITDWAV AAAQLLAAER QMDEAAIYTI HGFCQRMLAN NAFESGILFE QTLVQDELPL WRQACADFWR RHCYPLPLVI ARAVSQEWSG PEALLSDLSA YLQGETPKFR QAPGDDETIL SRHQHVVTQI DALKAEWRLA APELEALISR SGVDKRSYSS KHLPNWLEKV GLWAEQETED YQLPKELEKF RQSVLLEKTK KGAAPQHTLF SAIDSIFEQP LTLRDLILAR AISEIRFSVQ QEKRQRAELG FDDLLSKLDA ALQQSGGELL AQSIRTRYPV AMIDEFQDTD PQQYRIFHTV YGGQEACALL LIGDPKQAIY AFRGADIFTY IRARSEVSAH YTLETNWRSS FPMVQSVNRL FSLVNTPFLF EQIPFINVAA AKKNHDLSFE IKGEKQPALH FWLQPGDGVG VSEYQQVMAR QCAAQIRDWL TAGQQGQAEL LTTKGPKPVQ ASDITILVRS RAEAALIRDA LSALAIPSVY LSNRDSVFET TEAKDLLWLL QAVLAPEQER ALRSAMATGI LGLDARMLDA LNHDERAWDA LVDEFDHYRQ HWQRRGVLPM LREMMARRHL AENLLATPGG ERRLTDLLHL GELLQEAASQ LDSEHALIRW LAQQIAQPNP QSDSQQLRLE SDRHLVRVVT IHKSKGLEYP LVWLPFIGNF RQQQNVLYHD RHSFEALLDL NADEESQALA EEERLAEDLR LLYVALTRSV YHCSVGIAPL IKGGRKKQGE SDMHRSALGY LVQHGQPGDA HVLSEKLTEL ARSSNGDICV SPVEPPDDKP WQPQPEALPE LTARHFTRKM QDYWRVTSYS GLQQSGSTKK LYGSATGDVS QALGAPLQVL LPRLDIDAVG EQAVVTEDDH LTPHTFPRGA APGTFLHDLL EPLDFSQPIE LAWLSERLQQ QGFSEQWAPV LHQWLNDIVQ TPLTDTGATL AGLSPERKQA ELQFYLPIDS LLRAEVLDRL IKQYDPLSRQ CPVLDFQQVR GMLKGFIDLV FCWQGQYYLL DYKSNWLGED SRAYTVEAMT QAMAEHRYDL QYQLYTLALH RYLRHRLADY DYQRHFGGVI YLFLRGVDQQ HSGHGIFNCR PEQKLIEEMD RLFSGTIGSN ATASDKSGSN VIHSGERASR
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