| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A3202 |
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| Symbol | yccS |
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| ID | 5801677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010159 |
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| Strand | - |
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| Start bp | 3393722 |
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| End bp | 3395860 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641341031 |
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| Product | hypothetical protein |
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| Protein accession | YP_001607558 |
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| Protein GI | 162418605 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1289] Predicted membrane protein |
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| TIGRFAM ID | [TIGR01666] hypothetical membrane protein, TIGR01666
[TIGR01667] integral membrane protein, YccS/YhfK family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000417121 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0366922 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTCACTT TCGTCACTGA TTTACGCCGT TATGCATACA ACAGTAGCCT GCTTTATCAT
GCCCGTATTT TTATCGCTTT GGTGGGCGTA ACAGCCGTCC CATGGTGGAT TGAACAACCC
AAACTGACTA TCCCATTAAC ATTAGGGGTC GTTGCCGCAG CACTGACAGA TCTTGATGAC
CGCCTAACCG GGCGGTTACG TAACTTATTC ATTACGCTAA TTTGCTTTTT TGTAGCCTCA
TCTTCAATTG AGTTGCTATT TCCTTACCCA TGGTTTTTTG CTCTCGGTCT GACCTTATCA
ACCTGTGGCT TCACACTGCT AGGTGCATTA GGGCAGCGCT ATGCCACTAT TGCTTTCGGC
GCGTTGCTCA TTGCTATTTA CACTATGCTA GGTGCCTCGA TGTACCCTAC TTGGTACCAG
CAACCACTCT TACTGATATC AGGTGCTGTT TGGTATAACG TACTCACCTT ATTCGGCCAT
CTTATTTTCC CTATCCGTCC CTTACAGGAT AATTTAGCCC GTTGTTACCA ACAGTTGGCT
CATTATTTGG AAGCAAAGGC CAATTTGTTT GATCCAGATA TTGAATCTGA TATTAATCAA
CCCTTAATCG ACGTGGCGAT GGTCAACAGT ACATTAGTAG CCACCTTGAA TCAGGCCAAA
GCCTCACTCG TGACCCGACT AAAAGGTGAC CGTGGTCAAC GAGGCACTCG CCGGACACTT
CACTATTATT TTGTTGCGCA AGATATCCAT GAGCGGGCCA GTTCATCTCA TTTTCAATAC
CAGGTTCTGC GAGAAAAATT TCGTTACAGT GATGTTCTGT TCAGATTTCA GCGTTTACTG
AGTATGCAAG CTAAGGCCTG TAACCACCTC TCCCAATCCA TTCTGATGCA TCAGAAATAC
CAGCATGACC CACGTTTCGA ACGGGCATTT ACGTTCTTAG ATGCCGCACT GGCCAGAGAA
GAGCTGGCTC ATCACGAAAA TACTCAGCAA GTTAAGGCAC TTTCCTACTT GCTAAAAAAT
TTGCGCGCTA TTGATGCACA ACTGGCAGGG ATAGAGTCAG AGCAAGTCTT AGCGCAAGAC
CCAACACCTG ATAACCATTT GTCAGATGAC CGCATCACTG GCTGGAGTGA TATCAAACTA
CGAATCAGCC GCCATTTAAC ACCGCAATCA GCACTATTTC GCCATGCAAT ACGCATGTCT
ATTGTCTTGT GTGTGGGCTA CGCATTCATT CAATTCACTG GGTTACGCCA CGGTTATTGG
ATCTTGCTGA CCAGCCTTTT TGTCTGCCAG CCAAACTATA GTGCGACCCG TCGCCGCCTT
GCGCTACGCA TTATCGGCAC CTTAGCCGGT ATCCTTGTCG GTTTGCCTAT CCTTTATTTC
GTTCCTTCTA TTGAGGGGCA ACTCACCCTG ATTGTGATCA GTGGTGTTCT GTTTTTTGCG
TTCCGTAATG TCCAGTATGC TCACGCGACG ATGTTTATCA CCCTGCTAGT CTTATTGTGC
TTTAACCTTT TGGGTGAAGG GTTTGAGGTG GCCGCACCAC GGGTGTTTGA TACCTTGTTG
GGTTGTGCCA TTGCTTGGGT AGCCGTCAGT TTTATCTGGC CGGATTGGAA ATTTCGTCAA
CTGCCTACGG TGGTTCATAA AACATTTAAT GCTAATTGCC GCTATCTGGA TGCCATTTTG
GCGCAATATC ATCAAGGTAA AGACAATAGT TTGCTTTATC GGGTTGCCCG CCGTGATGCA
CATAATTGCG ATGCTGAATT AGCGTCAGTT ATTTCAAATA TGTCAGCGGA ACCCAAAAAC
GATAAAGAAA CTCAGGAAGC GGCATTCCGC TTACTTTGCC TGAACCACAC CATGTTGAGC
TATATTTCTG CTCTGGGTGC CCATCGTGAA AAATTGACCA ATAGCACCAC GCTAAATTTG
CTCAATGATG CTATTTGCTA TATTGAGGGC ACCCTGGCGA AAGAACAACC AGACAACGCT
AGAATGGCAA GTGCGTTAGC TGAGTTATCC AACCGGCTAC AGCACTGTCA TCCAGAACCA
GAGAGCAGAG ACCTATTGGT CTTACAACAA ATTGGTTTGC TGCTTGAACT GCTACCGGAA
CTCAGCGAAT TAAATAAACG TATTAGCCAG CCAGCCTAA
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| Protein sequence | MFTFVTDLRR YAYNSSLLYH ARIFIALVGV TAVPWWIEQP KLTIPLTLGV VAAALTDLDD
RLTGRLRNLF ITLICFFVAS SSIELLFPYP WFFALGLTLS TCGFTLLGAL GQRYATIAFG
ALLIAIYTML GASMYPTWYQ QPLLLISGAV WYNVLTLFGH LIFPIRPLQD NLARCYQQLA
HYLEAKANLF DPDIESDINQ PLIDVAMVNS TLVATLNQAK ASLVTRLKGD RGQRGTRRTL
HYYFVAQDIH ERASSSHFQY QVLREKFRYS DVLFRFQRLL SMQAKACNHL SQSILMHQKY
QHDPRFERAF TFLDAALARE ELAHHENTQQ VKALSYLLKN LRAIDAQLAG IESEQVLAQD
PTPDNHLSDD RITGWSDIKL RISRHLTPQS ALFRHAIRMS IVLCVGYAFI QFTGLRHGYW
ILLTSLFVCQ PNYSATRRRL ALRIIGTLAG ILVGLPILYF VPSIEGQLTL IVISGVLFFA
FRNVQYAHAT MFITLLVLLC FNLLGEGFEV AAPRVFDTLL GCAIAWVAVS FIWPDWKFRQ
LPTVVHKTFN ANCRYLDAIL AQYHQGKDNS LLYRVARRDA HNCDAELASV ISNMSAEPKN
DKETQEAAFR LLCLNHTMLS YISALGAHRE KLTNSTTLNL LNDAICYIEG TLAKEQPDNA
RMASALAELS NRLQHCHPEP ESRDLLVLQQ IGLLLELLPE LSELNKRISQ PA
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