Gene YpAngola_A3193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A3193 
Symbol 
ID5801668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp3383000 
End bp3384856 
Gene Length1857 bp 
Protein Length618 aa 
Translation table11 
GC content48% 
IMG OID641341022 
Productputative assembly protein 
Protein accessionYP_001607549 
Protein GI162421655 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2982] Uncharacterized protein involved in outer membrane biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.182103 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0103225 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACGAT TACTGACAAT GTTAGTTATC CTGCTAATTG TGTTAGTTGC AGGTATGAGC 
GCATTAGTGC TGTTGGTGAA TCCTAATGAT TTTCGCGCCT ATATGGTCAA ACAGGTAGAG
AAAAAGAGTG GTTACCACTT GCAGTTGGAG GGTGATTTGC GTTGGCACGT CTGGCCGCAA
CTCAGCATTA TCGCTGGGCG CATGGCGCTA ACCGCACCTG GCGCACTAGA ACCGGTGGTC
AGTGCTGAAA ATATGCGGTT GGATGTTAAA CTTTGGCCGT TACTGTCACA TCAACTGGAT
GTTAAACAAG TGATGTTGAA AGGGGCGGTG ATCCGTTTGA CCCCTGACAG CGAGGCCCAG
CAACAGATAG ATGCGCCGGT CGCCCCAATT GCACCTGCGG GCAGTACGCC AGTGAGCGAT
AACCGTGGCT GGACGCTAGA CATCAATAGA CTTCAAATCG CGGACAGTTT GCTTATTTGG
CAACGTTCTG ACAACGACCA AATTAATGTC CGGGATATCA ATCTCGAACT CAAGCAAGGC
GGGCAGCGTC AGGTGCAGGT CACTCTTGCC AGCCGTGTTA ATCGCAATCA GCGGGACTTA
ACTTTCTCAA TGGTCATTGA TGCCGATATG CATCAATATC CCCGACAGTT CAGTGCCAAT
ATCAGCCAGT TCACTTATAA ACTGGAAGGG GCTGATATTC CTGCAGGGGG GATCAGTGGT
GGAGGGGCGT TGGAAGCCAG TTATCAGAGT GATATTCAGC AATTACTACT TAATCAGTTA
AATTTTACTG CCAATAATAA CCAATTGGCA GGCAGTGTTA AGGCGACCTT TGGTGATGTG
CCTGACTACG TGGTTAATTT GACCTCTGAT AATCTCAATC TTGATGCGAT CTTTGGTTGG
CAGCCGAAGA GTTCAACAGC CAGTACCGAC GAAGCCAAAC AGCCTGTCAC GACAGCACCG
GTTATTGCTA TTCAGATAGA TGATGATGTA GGGCAAAATT TACAAGCATT ACGTGATTTT
ACGGCGCAAA CGACGGTTGT CGCCAATAAT GTGGTTTATC GCAACATTAA CATCAACCAG
TTGAATTTAC AGGCAACTAA CCAGCAGGGT GACTTACAGG TAACTCGCCT AACCGGTAAT
GCGTTGGAGG GGGACTTCTC ACTCGCGGGG GCATTGGATG TTACGGGCAA AAAAGTGTTG
GCTACGGTGA ATCCGCTGAT AAACCATATG GAATTGGGGC CAGTATTGCA GGCTGCAGGT
TTACCGCAGG TAATGACGGG TAAGTTTTCC ATGCAAGCGC AGTTGTCTGG AGATGGTGTG
AATCTCGCAG CATTTAAACA TCGCTGGCGG GGGGAAGCGC AAGTCAGTAT GAATAATGCC
CGGTTACAGG GCCTAAATAT TCAGCAATTG ATTCAACAGG CTGTCACACG TAGTACCAAT
GATGTCAAAG GTCAGGAACG CTATGAGCGA TACACTGAGG TTAAACAACT GCAAGCCTCT
CTGGCGCTGA ACCGAGGTGC AGTGAAAGTC AGCGGCCTCA ATGCCAGTTC GTCGTTAATT
TCCGTTAAAG GCAGCGGGGG GCTTAATCTC CCAACTCAGC AATGTGACAT GAATCTAGCT
GTACGCGTTA TGCAAGGTTG GAACGGGCAG AGTAGCCTTG TCAAAACATT ACAAAATACA
GATATTCCGT TGCGTATTTA TGGCCCATGG ACCCAGCTCA ATTATCAATT GAATGTTGAT
CAATTGCTGC GTAGTGAGTT ACAGCAGCGG GCCAAGAAAG CGTTGGGGGA GTGGGCTGAA
CGTAACCAAC AAAATCGCCG TGTGGACGAT CTGAAAAAGT CACTTGATAA GTTGTAA
 
Protein sequence
MRRLLTMLVI LLIVLVAGMS ALVLLVNPND FRAYMVKQVE KKSGYHLQLE GDLRWHVWPQ 
LSIIAGRMAL TAPGALEPVV SAENMRLDVK LWPLLSHQLD VKQVMLKGAV IRLTPDSEAQ
QQIDAPVAPI APAGSTPVSD NRGWTLDINR LQIADSLLIW QRSDNDQINV RDINLELKQG
GQRQVQVTLA SRVNRNQRDL TFSMVIDADM HQYPRQFSAN ISQFTYKLEG ADIPAGGISG
GGALEASYQS DIQQLLLNQL NFTANNNQLA GSVKATFGDV PDYVVNLTSD NLNLDAIFGW
QPKSSTASTD EAKQPVTTAP VIAIQIDDDV GQNLQALRDF TAQTTVVANN VVYRNININQ
LNLQATNQQG DLQVTRLTGN ALEGDFSLAG ALDVTGKKVL ATVNPLINHM ELGPVLQAAG
LPQVMTGKFS MQAQLSGDGV NLAAFKHRWR GEAQVSMNNA RLQGLNIQQL IQQAVTRSTN
DVKGQERYER YTEVKQLQAS LALNRGAVKV SGLNASSSLI SVKGSGGLNL PTQQCDMNLA
VRVMQGWNGQ SSLVKTLQNT DIPLRIYGPW TQLNYQLNVD QLLRSELQQR AKKALGEWAE
RNQQNRRVDD LKKSLDKL