Gene YpAngola_A3170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A3170 
SymbolhisD 
ID5801645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp3355171 
End bp3356502 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content54% 
IMG OID641341003 
Producthistidinol dehydrogenase 
Protein accessionYP_001607530 
Protein GI162420341 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0141] Histidinol dehydrogenase 
TIGRFAM ID[TIGR00069] histidinol dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.992848 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCGA CGAATTTCAA TACCCTGATC AATTGGCAAC AATGCAGTGA AGAACAGCAA 
AAAGCGCTGT TGAGCCGCCC AGCCATCAAT GCATCCGAGA GGATCACTGC GGCGGTCAGT
GACATCCTGG ACCGGGTGAA AGCGGAAGGC GATAGCGCCC TGCGTGATTT TAGCCAGCGT
TTTGACCATG TGCAGGTCGC GGATATCCGT ATCACTGCAT CAGAGATCGC TGCGGCCTCG
GCGCGCCTGA GTGACGATGT CAAGCACGCC ATGGCACAGG CGGTACGTAA TATTGAAATC
TTCCACAATG CGCAGAAAAT GCCGGTGGTG GATGTTGAAA CTCAGCCGGG TGTGCGTTGT
CAGCAAATCA CGCGTCCGAT TGCTTCCGTC GGCTTGTATA TTCCCGGTGG TTCTGCACCG
TTGCCATCAA CCGTACTGAT GCTCGGCACC CCAGCACGTA TTGCCGGTTG TCAGCGGGTC
GTTTTATGTT CTCCACCGCC TATTGCCGAT GAAATTTTGT ATGCCGCTCA ACTGTGCGGT
ATTCAGGAAG TGTTCCAGAT CGGCGGGGCA CAAGCGATCG CCGCCATGGC ATTCGGCAGT
GAATCGGTGC CTAAAGTGCA CAAAATTTTT GGGCCGGGCA ACGCTTATGT TACTGAGGCA
AAACGTCAGG TTAGCCAGCG CCTGGACGGT GCTGCCATCG ATATGCCCGC AGGCCCATCA
GAGGTGTTGG TGATCGCCGA CAGCGGTGCT ACACCTGCGT TTATCGCGGC GGATTTACTC
TCACAAGCGG AACACGGGCC TGATTCTCAA GTGATCTTAC TGACACCTGA TGCCGCTATC
GCACAAGCGG TGGCAGTCGA AGTTGAGCAA CAACTCGCGC TGTTATCCCG AGCCGATATT
GCCCGTCAGG CACTGGAAAG CAGCCGTTTG ATCGTGACCA ACGATTTACA GCAATGCATT
GATATCAGTA ATGCATACGG CCCTGAGCAT TTGATTCTAC AAATTCGTCA ACCAGAAGAA
ATCATTGACC AGATTGATAA CGCTGGCTCC GTGTTTATGG GCGATTGGTC ACCGGAATCG
GCTGGGGATT ACGCCTCGGG CACCAACCAC GTACTGCCAA CCTACGGTTA TACCTCAACC
TATTCCAGTT TAGGTTTGGC TGATTTTGTT AAGCGCATGA CCGTACAGCA ATTGACACCA
CAGGGTTTGT TAGGGCTGGC CTCCACCATC GAAACACTGG CACAGGCCGA ACAACTGACC
GCACACAAAA ATGCAGTTAC CCTGCGCGTT ACCGCCTTGA ATAACGCCCT GACCGCCGTG
AATAAGGAGT AA
 
Protein sequence
MQPTNFNTLI NWQQCSEEQQ KALLSRPAIN ASERITAAVS DILDRVKAEG DSALRDFSQR 
FDHVQVADIR ITASEIAAAS ARLSDDVKHA MAQAVRNIEI FHNAQKMPVV DVETQPGVRC
QQITRPIASV GLYIPGGSAP LPSTVLMLGT PARIAGCQRV VLCSPPPIAD EILYAAQLCG
IQEVFQIGGA QAIAAMAFGS ESVPKVHKIF GPGNAYVTEA KRQVSQRLDG AAIDMPAGPS
EVLVIADSGA TPAFIAADLL SQAEHGPDSQ VILLTPDAAI AQAVAVEVEQ QLALLSRADI
ARQALESSRL IVTNDLQQCI DISNAYGPEH LILQIRQPEE IIDQIDNAGS VFMGDWSPES
AGDYASGTNH VLPTYGYTST YSSLGLADFV KRMTVQQLTP QGLLGLASTI ETLAQAEQLT
AHKNAVTLRV TALNNALTAV NKE