| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A3125 |
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| Symbol | hda |
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| ID | 5801599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010159 |
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| Strand | + |
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| Start bp | 3312307 |
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| End bp | 3313026 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641340959 |
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| Product | DNA replication initiation factor |
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| Protein accession | YP_001607487 |
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| Protein GI | 162420351 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0593] ATPase involved in DNA replication initiation |
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| TIGRFAM ID | [TIGR03420] DnaA regulatory inactivator Hda |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000000265071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTGGTTG AGGTGCTTCT GAATACGCCG GCACAGCTTT CACTGCCACT CTATCTTCCC
GATGATGAAA CTTTTGCCAG TTTTTATCCG GGGGAGAACC CATCCCTGTT AGCAGCGATC
CAATCCGCCG TTCATCAGCC TCATGGCAGT TATATCTATT TCTGGTCGCG AGAAGGCGGT
GGACGTAGTC ATTTGCTACA TGCCGCTTGT GCTGAGCTAT CGCAGCAAGG TGAGGCGGTG
GGGTATGTTC CGCTGGATAA ACGCGCTTAC TTCATACCTG AAGTATTAGA GGGGATGGAG
CAACTGGCGC TGGTCTGCAT TGATAATATT GAGTGTATTG CAGGTGATGA ACAGTGGGAA
ATGGCGATGT TTAATCTCTA TAACCGCATT GTGGAAACTG GCCGTACCCG TTTATTGATC
ACGGGCGATC GCCCGCCGCG TCAACTCAAC CTTGGTTTAC CGGATCTGGC CTCGCGCCTG
GATTGGGGGC AGATTTATAA ATTGCAGCCG TTGTCAGATG ATGAAAAATT GCAGGCTTTG
CAGTTACGCG CCAAATTACG TGGTTTTGAA TTGCCAGAAG ATGTTGGCCG CTTTTTACTC
AAGCGTTTAG ACCGAGAAAT GCGCACTTTG TTTATGACGT TGGATCAACT GGATCGGGCC
TCAATTACGG CACAACGTAA GCTTACTATC CCATTTGTTA AAGAAATTCT TAGTCTTTAA
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| Protein sequence | MLVEVLLNTP AQLSLPLYLP DDETFASFYP GENPSLLAAI QSAVHQPHGS YIYFWSREGG
GRSHLLHAAC AELSQQGEAV GYVPLDKRAY FIPEVLEGME QLALVCIDNI ECIAGDEQWE
MAMFNLYNRI VETGRTRLLI TGDRPPRQLN LGLPDLASRL DWGQIYKLQP LSDDEKLQAL
QLRAKLRGFE LPEDVGRFLL KRLDREMRTL FMTLDQLDRA SITAQRKLTI PFVKEILSL
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