Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A3106 |
Symbol | gabT |
ID | 5801580 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 3288069 |
End bp | 3289358 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641340942 |
Product | 4-aminobutyrate aminotransferase |
Protein accession | YP_001607470 |
Protein GI | 162419701 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 76 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCACC GTGAATTGGA ACAACGCAGA AAAGAGGCGA CCCCACGTGG GATTGGTGTG TTATGTGATT TCTATGCGGT ACGGGCTGAA AATGCCACGC TGTGGGATGA ACAGGGGCGG GAATATATCG ATTTTACGGC GGGTATTGCG ACACTCAATA TCGGACACCG CCACCCGAAA GTGATGGCCG CTGTGCGCCA ACAACTGGAC CAGTTTACCC ATACTGCCTA TCAGGTGGTG CCTTACGCCA GTTATGTCAC ATTGGCAGAG AAAATTAATT CGCTAGCCCC TATTTCTGAT TCAAATATGA CGGCAGCGGG CAACAGTAAA ACCGCTTTTT TCACCACTGG GGTCGAAGCG ATAGAAAATG CCGTGAAAAT AGCGCGTGCG GCGACTGGCC GCCCTGGTGT GATTGCTTTC TCCGGGGCAT TTCATGGCCG AACCTTATTG GCGATGGCGT TGACCGGTAG AGCGGTGCCG TACAAAGTCG GTTTTGGTCC GTTCCCTGCC TCCATTTTTC ACGCCCTCTA TCCCAATGAG TTGTATGGCG TGAGTGTCGA AGAGGCCATC AGCAGTGTTG AGCGCCTGTT TCGTTGTGAT ATCAGTCCGA CACAAGTGGC GGCCATTCTA TTTGAGCCGA TTCAGGGCGA GGGCGGTTTT AATATCGCCC CGCCGGAATT TGTCAGTGCT TTGCGCACCC TGTGTGATGA GCACGGTATT TTGCTGATTG CCGATGAAGT ACAAACGGGG TTTGCCCGTA CAGGCAAGTT ATTTGCCATG GAATATTATC CCGACACCAA AGTTGATGTG ATCACCATGG CGAAAAGCCT TGGGGGCGGT ATGCCAATTT CCGCGGTCAC GGGTCGGGCC GACATTATGG ATGCCCCGTT GCCGGGGAGT TTGGGCGGTA CTTATGCCGG TAACCCACTG GCGGTGGCTG CGTCACTGGC GGTGCTCGAT ATTATTGCTG AAGAGAAGTT ATGCGAGCGC GCCCTGATTT TAGGCGCGAA GTTGGTTGAC GTACTGGAAA AAGCCCAAAT GAGCAATGCG GCCATTGTGG GCATTCGTGC GCGTGGATCC ATGGTGGCGG TGGAATTTAA CGATCCCGTC AGCGGTAAAC CGTCACCAGA ACTGACGCGC GCCTATCAAC GTCAGGCACT GGAAGAGGGG CTGTTACTCC TGAGTTGCGG TGTCCACAGC AACGTGATCC GCTTCCTCTA CCCATTGACC ATTCCCGACA AGCAATTTAA ACAGGCGATG AATATTCTTA CCCGCCTACT GGCGAGCTAA
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Protein sequence | MSHRELEQRR KEATPRGIGV LCDFYAVRAE NATLWDEQGR EYIDFTAGIA TLNIGHRHPK VMAAVRQQLD QFTHTAYQVV PYASYVTLAE KINSLAPISD SNMTAAGNSK TAFFTTGVEA IENAVKIARA ATGRPGVIAF SGAFHGRTLL AMALTGRAVP YKVGFGPFPA SIFHALYPNE LYGVSVEEAI SSVERLFRCD ISPTQVAAIL FEPIQGEGGF NIAPPEFVSA LRTLCDEHGI LLIADEVQTG FARTGKLFAM EYYPDTKVDV ITMAKSLGGG MPISAVTGRA DIMDAPLPGS LGGTYAGNPL AVAASLAVLD IIAEEKLCER ALILGAKLVD VLEKAQMSNA AIVGIRARGS MVAVEFNDPV SGKPSPELTR AYQRQALEEG LLLLSCGVHS NVIRFLYPLT IPDKQFKQAM NILTRLLAS
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