Gene YpAngola_A3051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A3051 
SymbolhupB 
ID5801524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp3224874 
End bp3225146 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content47% 
IMG OID641340888 
Producttranscriptional regulator HU subunit beta 
Protein accessionYP_001607417 
Protein GI162421829 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00488463 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATAAGT CACAACTGAT AGACAAAATT GCCGCAGGTG CTGATATTTC TAAAGCGGCC 
GCTGGGCGTG CGTTAGATGC AATTATTACT TCTGTTACTG AATCCTTGAA AGAAGGGGAT
GATGTGGCTC TGGTTGGTTT TGGTACTTTT GCAGTACGTG AGCGTTCTGC ACGTACTGGC
CGTAACCCGC AGACAGGTAA AGAAATTAGT ATTCCAGCCG CTAAAGTACC GGGTTTTCGT
GCCGGTAAAG GCCTGAAAGA TGCAGTAAAC TGA
 
Protein sequence
MNKSQLIDKI AAGADISKAA AGRALDAIIT SVTESLKEGD DVALVGFGTF AVRERSARTG 
RNPQTGKEIS IPAAKVPGFR AGKGLKDAVN