| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A3012 |
|---|
| Symbol | |
|---|
| ID | 5801484 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | - |
|---|
| Start bp | 3182331 |
|---|
| End bp | 3183200 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641340851 |
|---|
| Product | LysR family substrate-binding transcriptional regulator |
|---|
| Protein accession | YP_001607381 |
|---|
| Protein GI | 162420615 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.450438 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.000703378 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTGA CCCAGCTACG CATGTTTTGT TGTGTAGCGG AAACCGGCTC CGTTGCCCGA
GCAGCGGAGC AAATGCACCG CGTTCCTTCA AATCTCACTA CGCGTCTGCG CCAGCTTGAA
CTGGAGCTAG GGGCTGATTT GTTTATTCGT GAAAAACAGC GCCTGCGTTT ATCACCAATG
GGCCATAATT TTCTCTGTTA TGCCAACCGT ATTTTGGCCT TAAGCGAAGA AGCCATGAGC
ATTACCCACG CAGGCGAACC GGCGGGTAAC TTCCCGTTAG GTTCAATGGA AAGCACCGCC
GCCACCCGTT TACCTAATTT GCTAGCGGCC TACCACCAGC GCTACCCCAA GGTATCGTTG
TCGCTGATTA CCGGAACCTC GGGTGAAATT ATTGAACAAG TCCGCGCGGG TACACTGGCA
ACCGCATTGG TCGATGGTCC AGTGCAGCAC GATGAGTTAC ACGGCTGCCG CTCTTTCGAC
GAACAACTGG TGATCATTTC TTGTCTTGAA CGCCCCCCCA TACTGCAAGC CCGCGATGCC
GTGGACGAAA CGCTGTTTGC TTTTCGCCCC AGTTGCTCTT ACCGGCTGCG ATTGGAAAGC
TGGTTTCGAC AAGTGGGCGT ATTACCGGGA CATATCATGG AAATCCAGTC CTATCATGCG
ATGCTGGCCT GTGTCGCCAG TGGCGCCGGG CTGGCCCTCA TCCCTCTCTC AGTCCTTACG
CTGCTACCGG GCCATGAGCG GGTGCAAGTT CATCCGTTAC CTCCGGATAT TGCCCACACG
GCAACCTGGC TTATTTGGCG TAAAGATGCC TTCAGCCCTA ATGTCCGCGC ATTAAAAGAG
CTGATTATCG AGAACGTTGA AATACCTTGA
|
|---|
| Protein sequence | MDLTQLRMFC CVAETGSVAR AAEQMHRVPS NLTTRLRQLE LELGADLFIR EKQRLRLSPM
GHNFLCYANR ILALSEEAMS ITHAGEPAGN FPLGSMESTA ATRLPNLLAA YHQRYPKVSL
SLITGTSGEI IEQVRAGTLA TALVDGPVQH DELHGCRSFD EQLVIISCLE RPPILQARDA
VDETLFAFRP SCSYRLRLES WFRQVGVLPG HIMEIQSYHA MLACVASGAG LALIPLSVLT
LLPGHERVQV HPLPPDIAHT ATWLIWRKDA FSPNVRALKE LIIENVEIP
|
|---|
| |