Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A2940 |
Symbol | setA |
ID | 5801412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 3093452 |
End bp | 3094633 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641340787 |
Product | sugar efflux transporter A |
Protein accession | YP_001607317 |
Protein GI | 162418235 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00899] sugar efflux transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGATCTG CACGAGCCTT TTCCCGTCGT ATCAACCCGG TTTTCCTCGC TTTCTTTGTG GTGGCTTTTC TTTCCGGCAT CGCGGGTGCG TTGCAAGCCC CGACATTAAG CCTGTTTTTA AGCACAGAGT TAAAAGTGCG TCCGCTGTGG GTCGGATTGT TTTATACCGT GAATGCCATT GCCGGTATCA CCGTGAGCTT CCTACTGGCC AAACGCTCAG ATCTGGGCGG GGATCGGCGT AAATTAATTC TGATCTGCTA TCTGATGGCG GTCGGAAATT GCCTGCTATT CGCTTTTAAT CGTGATTATC TGACGTTGAT CACTTTAGGT GTTTTGATGG CCTCGGTGGC GAATACCGCG ATGCCGCAAA TTTTCGCCTT GGCACGGGAA TATGCGGATA ACTCTGCGCG TGAAGTGGTG ATGTTCAGTT CGATTATGCG TGCGCAATTA TCATTGGCTT GGGTTATCGG GCCACCGCTG TCATTTATGT TAGCGCTGAA TTATGGCTTT ACGCTGATGT TTAGCATTGC CGCCGGTATT TTTGTTATTA GTGCGCTGGT GGTCTGGTTT ATCCTGCCGT CGGTTAAACA GCCTGAGCCC GTAGCCGATG CCCCCGTGGT GGTACAAGGC AGTTTGTTTG CCGATAAAAA TGTCTTACTG CTGTTCATTG CCTCAATGCT GATGTGGACG TGTAATACCA TGTACATCAT TGATATGCCG CTCTATATCA CCGCTAATTT AGGGTTGCCT GAGCGTTTGG CGGGTTTGCT GATGGGGACC GCCGCCGGGC TGGAAATTCC TATCATGTTG TTGGCAGGTT ACTCGGTTAG GCGCTTTGGT AAACGTAAAA TCATGCTGTT TGCGGTGATG GCGGGGGTGC TGTTTTATAC CGGGCTGGTG CTGTTTAAAT TCAAAACCGC ACTGATGATA TTGCAGATTT TTAATGCCAT CTTTATCGGC ATCGTCGCCG GTATTGGTAT GCTCTATTTT CAGGATCTCA TGCCGGGGCG GGCAGGTGCC GCAACCACGT TATTTACCAA CAGTATTTCT AGTGGGGTGA TTTTGGCCGG TGTGCTGCAA GGTGTATTGA CTGAAACCTG GGGGCATAAT GCGGTTTATG TCGCTGCGAT GGTGTTGGTT ATTTTGGCGT TGATCATCTG CGCCAAAGTG AGAGAGGCTT AG
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Protein sequence | MRSARAFSRR INPVFLAFFV VAFLSGIAGA LQAPTLSLFL STELKVRPLW VGLFYTVNAI AGITVSFLLA KRSDLGGDRR KLILICYLMA VGNCLLFAFN RDYLTLITLG VLMASVANTA MPQIFALARE YADNSAREVV MFSSIMRAQL SLAWVIGPPL SFMLALNYGF TLMFSIAAGI FVISALVVWF ILPSVKQPEP VADAPVVVQG SLFADKNVLL LFIASMLMWT CNTMYIIDMP LYITANLGLP ERLAGLLMGT AAGLEIPIML LAGYSVRRFG KRKIMLFAVM AGVLFYTGLV LFKFKTALMI LQIFNAIFIG IVAGIGMLYF QDLMPGRAGA ATTLFTNSIS SGVILAGVLQ GVLTETWGHN AVYVAAMVLV ILALIICAKV REA
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