Gene YpAngola_A2938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A2938 
SymbolleuC 
ID5801410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp3091164 
End bp3092594 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content54% 
IMG OID641340785 
Productisopropylmalate isomerase large subunit 
Protein accessionYP_001607315 
Protein GI162419292 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0065] 3-isopropylmalate dehydratase large subunit 
TIGRFAM ID[TIGR00170] 3-isopropylmalate dehydratase, large subunit 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCACAA CATCATCTCA GAGCAAAACG TTATACCAAA AATTGTACGA TGCGCACATT 
GTGCATGAAG CCCCCAATGA GACCCCATTG CTGTATATCG ACCGCCATTT AGTGCATGAG
GTCACCTCAC CGCAAGCCTT TGATGGTTTG CGTGCCATGG GCCGCCCGGT GCGTCAACCG
GGTAAGACTT TCGCTACCAT GGATCACAAC GTTTCTACCC AAACAAAAGA CATTAACGCC
AGTGGTGAGA TGGCCCGTAT TCAGATGCAA GAGTTAATTA AAAACTGCGC TGAATTCGGT
GTCTCATTGT ATGACCTGAA CCACCCTTTC CAAGGGATCG TGCATGTCAT TGGCCCTGAG
CAAGGCATGA CGTTACCGGG CATGACCATC GTTTGTGGTG ACTCACATAC CGCCACTCAC
GGCGCATTCG GCTCCTTGGC CTTTGGTATC GGCACCTCAG AAGTTGAGCA TGTGTTGGCG
ACCCAAACCC TGAAGCAGGG GCGAGCCAAA ACCATGAGAA TCGAAGTGAA TGGCACTGTC
GGCGCGGGTA TTACGGCTAA AGACATCGTG CTGGCGATTA TCGGTAAAAC CGGGAGCGCA
GGCGGTACTG GCCATGTGGT GGAGTTCTGT GGCAGCGCGA TTGAAGCGTT GAGCATGGAA
GGCCGGATGA CATTATGCAA CATGGCGATC GAAATGGGGG CCAAAGCCGG TTTGGTTGCC
CCTGATGACA CCACCTTTGC CTATCTGAAA GGCCGTCAGT TCGCCCCAAC TGGCGAGCAA
TGGGAACAAG GTGTTGCCTA CTGGCGTACC CTGAAATCTG ATGCTGATGC CCAATTCGAT
ACCATCGTGA CACTGGATGC CGCTGATATC GCGCCACAGG TGACGTGGGG AACCAATCCG
GGTCAGGTCA TTGCGGTTAA TCAAATCATT CCTGCCCCTG AGTCTTTCAG CGATCCGGTC
GAACGTGCAT CAGCAGAGAA AGCCTTAGCT TATATGGACT TGCGCCCCGG CATTAAATTG
ACTGAAGTGG CGATTGATAA AGTCTTTATC GGCTCTTGCA CTAACTCACG TATTGAAGAT
TTACGTGCGG CAGCGGCTAT TGCCCAAGGG CGTAAAGTCG CCAAGGGTGT GCAAGCTATC
GTGGTGCCAG GCTCCGGCCC GGTGAAAGCG CAGGCAGAAG CGGAAGGTTT GGATAAGATC
TTTATCGCCG CAGGTTTTGA GTGGCGTCTG CCCGGTTGCT CGATGTGTTT GGCCATGAAT
AATGACCGCC TGGAGCCCGG CGAACGTTGT GCCTCCACCA GCAACCGTAA TTTTGAAGGC
CGCCAAGGCC GTGGGGGGCG CACACATTTG GTCAGCCCAG CCATGGCCGC CGCTGCCGCC
GTCAGTGGTC ATTTTGCTGA TGTTCGCGAA TTATCCGCCA CCACCCACTA A
 
Protein sequence
MGTTSSQSKT LYQKLYDAHI VHEAPNETPL LYIDRHLVHE VTSPQAFDGL RAMGRPVRQP 
GKTFATMDHN VSTQTKDINA SGEMARIQMQ ELIKNCAEFG VSLYDLNHPF QGIVHVIGPE
QGMTLPGMTI VCGDSHTATH GAFGSLAFGI GTSEVEHVLA TQTLKQGRAK TMRIEVNGTV
GAGITAKDIV LAIIGKTGSA GGTGHVVEFC GSAIEALSME GRMTLCNMAI EMGAKAGLVA
PDDTTFAYLK GRQFAPTGEQ WEQGVAYWRT LKSDADAQFD TIVTLDAADI APQVTWGTNP
GQVIAVNQII PAPESFSDPV ERASAEKALA YMDLRPGIKL TEVAIDKVFI GSCTNSRIED
LRAAAAIAQG RKVAKGVQAI VVPGSGPVKA QAEAEGLDKI FIAAGFEWRL PGCSMCLAMN
NDRLEPGERC ASTSNRNFEG RQGRGGRTHL VSPAMAAAAA VSGHFADVRE LSATTH