Gene YpAngola_A2875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A2875 
Symbol 
ID5801347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp3017387 
End bp3018736 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content47% 
IMG OID641340726 
Producthypothetical protein 
Protein accessionYP_001607256 
Protein GI162419779 
COG category[S] Function unknown 
COG ID[COG3522] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03353] type VI secretion protein, VC_A0114 family 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGAACTA ACAAAGTCGT TTGGAGTGAG GGGCTTTTTC TTCGCCCACA ACTTTTTCAA 
CAGCAAGAGC GCTATCTTGA ATATTACGCC CATAAGCGAG CTGCAACGAT AACCCCATTC
TTTTGGGGAT TTGCGCAATA TGAAATTGAT AGAGAAGCAC TCTCGTATGG CAAATTAGTA
TTGCGATCTG GGAAGGGCGT GTTACCCGAC GGTACACCAT TTGATATTCC CGGCCATGCT
GAATTGCCTG AACCGCTCAC TATCACCCCA GAACATCTGG GTAAGTTGAT CTATCTGGCG
GTACCACTGC GCCTGGATAA CAGTGATGAA ACCATTTTTG ATGAGCACGA TATGAGCTCA
TTGGCACGTT TTTACGCCTA TGAAGCTGCG CTCAACGATA CCAATGCCAT TCGGCAAGGG
CCGAAGCCGG TACAACTGTC AAGATTACGT CTCAGATTAG TCTCAGAAGG TGAGATGACA
GAATCATGGA TTGGGCTGCC ATTAACCAAA GTCAGAGCGA TTCAGCCTGA TGGGAGTGTC
TTGCTACACA CCGAAGACTA TATTCCTCCG GTGACGGGTT ATGCCGCAAG TTCATTGCTG
TCTGAATGGC TAACCCATCT TAATGGTTTG GTTAAAATGC GCGCAGAGAT GTTGGCCAAT
CGCTTGTCAA ACAGTGATGG GAAAGCGAGC GCCAGCGCAG AAATTGTCGA TTATTTGTTA
CTGCAAATTT TTAATAAATA TGAGCCGATT CTCGATCATT TAAGGCATAT TCCTGAATTA
CCGCCTATTA CGCTTTATCA GGAATTGGCT AAGTTCTCGG GGGAATTATC TACCTTTATC
CGGACCAAAA CCCGCCGACC CCGCCCGGCA CCTGGCTATG ATCATGCGAA GCTCTATGCG
TCTATTCGTC CGTTGGTTGA CGAAGTTCAT GAACTACTGA ACCAGATCTT GGTGCGTGCT
GGGCAGATGA TACCGCTGGA GACGAAAGGC AATGGCGTTT GGTCTGCCTC CGTACTGCCT
AATGAATTAC GCTCGTTTTC AAATCTGGTC CTTGCCGTTC ATGCGCAATT ACCGATGGAT
GTGCTACAGC ATCAATTTTC AGTACAAACA AAAATCAGCG CACCTCAGCA ATTGCATGAA
CTGGTGCGAT CGCATTTGCC AGGGTTGGAA CTACAGCGTT TGCCGGTACC GCCCAGACAA
ATTCCGTATA GCGCAGGGTA CGTTTATTTT GAATTGATAA AAAATGGCCC CTTCTGGGAC
AAAGTTTCCA ATGCTGGTGC CATTGCCCTG CATGTGGCGG GTGATTTCCC TGCCTTGAAA
ATGGAGCTCT GGGGGATTAG AGATTCATGA
 
Protein sequence
MRTNKVVWSE GLFLRPQLFQ QQERYLEYYA HKRAATITPF FWGFAQYEID REALSYGKLV 
LRSGKGVLPD GTPFDIPGHA ELPEPLTITP EHLGKLIYLA VPLRLDNSDE TIFDEHDMSS
LARFYAYEAA LNDTNAIRQG PKPVQLSRLR LRLVSEGEMT ESWIGLPLTK VRAIQPDGSV
LLHTEDYIPP VTGYAASSLL SEWLTHLNGL VKMRAEMLAN RLSNSDGKAS ASAEIVDYLL
LQIFNKYEPI LDHLRHIPEL PPITLYQELA KFSGELSTFI RTKTRRPRPA PGYDHAKLYA
SIRPLVDEVH ELLNQILVRA GQMIPLETKG NGVWSASVLP NELRSFSNLV LAVHAQLPMD
VLQHQFSVQT KISAPQQLHE LVRSHLPGLE LQRLPVPPRQ IPYSAGYVYF ELIKNGPFWD
KVSNAGAIAL HVAGDFPALK MELWGIRDS