Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A2810 |
Symbol | rpoB |
ID | 5801282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 2938357 |
End bp | 2942385 |
Gene Length | 4029 bp |
Protein Length | 1342 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641340666 |
Product | DNA-directed RNA polymerase subunit beta |
Protein accession | YP_001607196 |
Protein GI | 162420540 |
COG category | [K] Transcription |
COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.102382 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.453839 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTTACT CCTATACCGA GAAAAAACGT ATTCGTAAGG ATTTTGGTAA ACGTCCACAA GTTTTGGACA TACCTTATCT CCTTTCTATC CAACTTGACT CGTTCCAGAA ATTTATCGAG CAAGATCCCG AAGGGCAGCA CGGACTAGAA GCAGCATTCC GTTCTGTTTT TCCTATCCAG AGCTACAGCG GCAATTCGGA GCTGCAATAC GTTAGCTACC GTCTTGGTGA GCCAGTATTC GACGTCAAAG AGTGCCAGAT CCGTGGTGTG ACTTATTCAG CACCGCTGCG CGTTAAACTG CGTCTGGTTA TCTATGAGCG GGAAGCTCCG GAAGGTACGG TCAAAGACAT CAAAGAACAA GAAGTCTACA TGGGTGAAAT TCCACTCATG ACCGAAAATG GTACCTTTGT TATTAACGGT ACTGAGAGGG TTATCGTATC TCAGTTGCAC CGTAGCCCTG GTGTGTTCTT TGACAGCGAT AAGGGTAAAA CCCATTCATC GGGTAAAGTG CTGTACAACG CACGTATCAT CCCTTACCGC GGTCCATGGT TAGATTTCGA GTTTGATCCG AAAGACAACC TGTTTGTACG TATTGACCGT CGCCGTAAAT TGCCTGCAAC CATCATTCTG CGTGCATTGA ATTTCACCAC TGCACAGATC TTGGATCTGT TCTTTGAGAA AGTGGTCTTT GAGATTCGTG ATAACAAGCT GCAGATGGAA TTGGTTCCAG AGCGCTTGCG CGGTGAAACG GCATCCTTTG ATATTGAAGC GAATGGCAAA GTTTACGTCG AGAAAGCGCG TCGTATTACT GCTCGTCATA TTCGCCAGCT TGAAAAAGAC GGCATTGACC GCATCGAAGT ACCGGTTGAA TACATTGCCG GTAAAGTTGT TGCTAAAGAC TATGTTGATG CGAGCACCGG TGAACTGATC TGTGCCGCTA ACATGGAGCT GTCACTGGAT CTGCTGGCTA AGTTGAGCCA AGCTGGCCAC AAGCAAATTG AAACATTGTT CACCAACGAT CTGGATCACG GTGCTTATAT CTCCGAGACC CTGCGTGTTG ACCCAACCAG CGATCGTCTG AGCGCTTTGG TTGAGATCTA TCGCATGATG CGTCCTGGCG AGCCACCAAC ACGTGAAGCC GCTGAAAATC TGTTTGAGAA TCTGTTCTTC TCCGAAGACC GCTATGATTT ATCTGCGGTT GGCCGGATGA AGTTCAACCG TTCTCTGCTG CGTGACGAGA TCGAAGGTTC CGGTATCCTG AGCAAAGAAG ACATCACAGA AGTGATGAAA AAGCTCATTG ATATCCGTAA CGGTAGAGGC GAAGTGGATG ATATCGACCA CTTGGGCAAC CGTCGTATTC GTTCCGTTGG CGAGATGGCT GAAAACCAGT TCCGTGTAGG TCTGGTTCGT GTTGAGCGTG CAGTTAAAGA GCGTTTGTCT CTGGGCGACC TTGATACTCT GATGCCACAG GACATGATCA ACGCCAAGCC TATCTCGGCT GCGGTGAAAG AGTTCTTTGG TTCCAGCCAG TTATCCCAAT TTATGGACCA AAACAACCCG TTGTCTGAGA TTACGCATAA GCGCCGTATC TCTGCATTGG GCCCGGGCGG TTTGACCCGT GAACGTGCTG GCTTTGAAGT TCGAGACGTA CACCCGACTC ACTACGGTCG CGTATGTCCA ATTGAAACGC CAGAAGGTCC AAACATCGGT TTGATCAACT CCTTGTCTGT ATATGCACAG ACTAACGAGT ATGGTTTCCT GGAAACACCT TATCGTCGTG TACGTGATGG TGTGGTGACC GATGAAATTA ACTATCTGTC TGCTATTGAA GAAGGCAACT TCGTTATCGC TCAGGCGAAC TCCAACCTGG ATGATGAAGG CCGCTTTTTA GAAGATTTGG TGACTTGTCG TAGCAAAGGC GAATCAAGCC TGTTTAGCCG CGAGCAAGTT GACTACATGG ACGTATCTAC TCAGCAAATC GTATCCGTTG GTGCTTCTCT GATTCCATTC TTGGAACACG ATGACGCCAA CCGTGCCTTG ATGGGCGCGA ACATGCAACG TCAGGCGGTT CCTACTCTGC GTGCTGATAA GCCGTTGGTG GGTACTGGTA TGGAACGTGC AGTGGCGGTT GACTCAGGGG TAACCTCTGT AGCCAAACGT GGCGGTACTG TTCAGTACGT AGATGCATCC CGTATCGTTA TTAAAGTTAA CGAAGATGAG ATGCACCCAG GCGAAGCCGG CATTGATATT TATAACCTGA CCAAATACAC CCGTTCTAAC CAGAACACCT GTATCAACCA GATGCCGTGT GTGAATCTGG GTGAGCCAAT CGAGCGCGGT GACGTGCTGG CAGATGGCCC ATCGACAGAC CTGGGCGAAC TGGCATTGGG TCAGAACATG CGCGTAGCGT TCATGCCTTG GAACGGTTAC AACTTCGAAG ACTCCATCTT AGTCTCCGAG CGCGTGGTGC AAGAAGATCG CTTCACAACC ATCCACATTC AGGAATTGGC ATGTGTGTCA CGCGACACCA AGTTAGGGCC TGAAGAGATC ACTGCCGATA TCCCGAACGT GGGTGAAGCC GCGCTCTCCA AATTGGATGA ATCCGGTATC GTGTATATCG GTGCTGAAGT GACTGGTGGT GACATTCTGG TTGGTAAGGT AACGCCTAAA GGTGAAACCC AACTGACGCC AGAAGAGAAA CTGTTACGTG CGATCTTCGG TGAGAAAGCG TCTGATGTTA AAGACTCTTC TCTGCGTGTA CCAAACGGTG TTTCTGGTAC GGTTATCGAC GTCCAGGTCT TTACTCGCGA TGGCGTAGAA AAAGACAAAC GTGCGTTGGA AATCGAAGAG ATGCAACTGA AACAGGCTAA GAAAGACCTG ACTGAAGAGT TGCAGATCCT GGAAGCGGGC TTGTTTGCAC GTATCCACGC GGTTCTGGTT TCTGGTGGCA TCGAAGCTGA GAAGCTGAGC AAGTTACCAC GTGAACGCTG GCTGGAACTG GGCCTGACCG ACGAAGACAA GCAAAACCAA CTGGAACAGT TGGCAGAGCA GTACGACGAA ATGAAATCTG AATTCGAGAA GAAGATGGAT GCCAAGCGTC GTAAAATCAC CCAAGGCGAT GATCTAGCAC CTGGTGTGCT GAAAATCGTC AAGGTGTATC TGGCGGTTAA ACGTCAGATT CAACCGGGTG ATAAAATGGC CGGTCGTCAC GGTAACAAAG GTGTTATCTC TAAGATTAAC CCAATCGAAG ATATGCCTTA CGATGAAAAC GGTACGCCGG TAGACATCGT TCTGAACCCG CTGGGCGTAC CATCGCGTAT GAACATCGGT CAGATTTTGG AAACCCACTT AGGGATGGCA GCGAAGGGTA TCGGCGAGAA AATCAACGCC ATGCTCAAGA AGCAGGAAGA AGTTGCCAAA CTGCGTGAGT TCATCCAGAA GGCCTACGAT CTGGGCGACA ACGTTTGTCA GAAAGTTGAT CTGAGCACCT TTACCGATGA CGAAGTACTG CGTCTGGCAG AGAACCTGAA AAAAGGTATG CCAATCGCAA CGCCAGTCTT CGATGGTGCG ACAGAGAAAG AAATCAAGGA ACTGTTACAG CTGGGTGGCC TGCCAACGTC TGGTCAGATT ACCTTGTTTG ACGGCCGTAC CGGTGAGCAA TTTGAACGCC AGGTTACTGT CGGCTACATG TACATGCTGA AACTGAACCA CTTGGTTGAT GACAAGATGC ATGCGCGTTC TACCGGTTCT TATAGCTTGG TTACTCAGCA GCCGCTGGGT GGTAAAGCTC AGTTCGGTGG TCAGCGCTTC GGTGAGATGG AAGTGTGGGC GTTGGAGGCT TATGGCGCCG CGTACACATT GCAAGAAATG CTTACCGTCA AGTCCGACGA TGTAAACGGC CGTACCAAGA TGTACAAAAA CATCGTGGAT GGCGATCACC GTATGGAACC AGGAATGCCG GAGTCCTTCA ACGTATTGTT GAAAGAAATC CGCTCTCTGG GCATCAATAT CGAGCTGGAA GAAGAGTAA
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Protein sequence | MVYSYTEKKR IRKDFGKRPQ VLDIPYLLSI QLDSFQKFIE QDPEGQHGLE AAFRSVFPIQ SYSGNSELQY VSYRLGEPVF DVKECQIRGV TYSAPLRVKL RLVIYEREAP EGTVKDIKEQ EVYMGEIPLM TENGTFVING TERVIVSQLH RSPGVFFDSD KGKTHSSGKV LYNARIIPYR GPWLDFEFDP KDNLFVRIDR RRKLPATIIL RALNFTTAQI LDLFFEKVVF EIRDNKLQME LVPERLRGET ASFDIEANGK VYVEKARRIT ARHIRQLEKD GIDRIEVPVE YIAGKVVAKD YVDASTGELI CAANMELSLD LLAKLSQAGH KQIETLFTND LDHGAYISET LRVDPTSDRL SALVEIYRMM RPGEPPTREA AENLFENLFF SEDRYDLSAV GRMKFNRSLL RDEIEGSGIL SKEDITEVMK KLIDIRNGRG EVDDIDHLGN RRIRSVGEMA ENQFRVGLVR VERAVKERLS LGDLDTLMPQ DMINAKPISA AVKEFFGSSQ LSQFMDQNNP LSEITHKRRI SALGPGGLTR ERAGFEVRDV HPTHYGRVCP IETPEGPNIG LINSLSVYAQ TNEYGFLETP YRRVRDGVVT DEINYLSAIE EGNFVIAQAN SNLDDEGRFL EDLVTCRSKG ESSLFSREQV DYMDVSTQQI VSVGASLIPF LEHDDANRAL MGANMQRQAV PTLRADKPLV GTGMERAVAV DSGVTSVAKR GGTVQYVDAS RIVIKVNEDE MHPGEAGIDI YNLTKYTRSN QNTCINQMPC VNLGEPIERG DVLADGPSTD LGELALGQNM RVAFMPWNGY NFEDSILVSE RVVQEDRFTT IHIQELACVS RDTKLGPEEI TADIPNVGEA ALSKLDESGI VYIGAEVTGG DILVGKVTPK GETQLTPEEK LLRAIFGEKA SDVKDSSLRV PNGVSGTVID VQVFTRDGVE KDKRALEIEE MQLKQAKKDL TEELQILEAG LFARIHAVLV SGGIEAEKLS KLPRERWLEL GLTDEDKQNQ LEQLAEQYDE MKSEFEKKMD AKRRKITQGD DLAPGVLKIV KVYLAVKRQI QPGDKMAGRH GNKGVISKIN PIEDMPYDEN GTPVDIVLNP LGVPSRMNIG QILETHLGMA AKGIGEKINA MLKKQEEVAK LREFIQKAYD LGDNVCQKVD LSTFTDDEVL RLAENLKKGM PIATPVFDGA TEKEIKELLQ LGGLPTSGQI TLFDGRTGEQ FERQVTVGYM YMLKLNHLVD DKMHARSTGS YSLVTQQPLG GKAQFGGQRF GEMEVWALEA YGAAYTLQEM LTVKSDDVNG RTKMYKNIVD GDHRMEPGMP ESFNVLLKEI RSLGINIELE EE
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