Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A2753 |
Symbol | cpxR1 |
ID | 5801225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 2878499 |
End bp | 2879182 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641340612 |
Product | transcriptional regulatory protein CpxR |
Protein accession | YP_001607146 |
Protein GI | 162419859 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000000494292 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATTT TGTTAGTCGA TGATGATCTT GAACTGGGCA CGATGTTGAA GGAATATTTG GGCGGAGAGG GGTTTACTGC CAAACATGTA TTGACCGGCA AAGCGGGCAT TGATGGAGCC TTGTCCGGCG ATTACACCGC GCTTATCCTC GACATTATGT TGCCTGATAT GAGTGGTATT GATGTATTAC GGCAAGTGCG TAAAAAAAGC CGTTTGCCGA TCATTATGTT AACGGCTAAA GGCGACAATA TTGATCGGGT GATCGGTCTT GAAATGGGCG CGGATGACTA CATGCCTAAA CCGTGCTATC CACGTGAATT GGTGGCTCGA TTACGCGCTG TTTTACGCCG TTTTGAAGAG CAGCCAACTT TGTCCTCCAT TGATAGCGGT ATTATCACGC AAGGCGGATT GACACTTAAC CCCTCTACCC GCAGTAGCGA ATGGCAGGGT AAACCGTTTG ATCTGACCGC ATCGGAATTC AATCTATTAG AGCTGCTGCT ACGTTCACCT GAACGCGTGG TGACTAAAGA CGAACTATCT GATAAAGGGT TAGGGCGGCC TCGCGAAGCC TATGACCGTA GTGTCGATGT GCATATCAGT AATATTCGCC AGAAACTCGC CGCCCTACCG GGTAATCATT TAAATATTGA AACGGTACGT AGCATTGGCT ATCGCATCCG ATAA
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Protein sequence | MKILLVDDDL ELGTMLKEYL GGEGFTAKHV LTGKAGIDGA LSGDYTALIL DIMLPDMSGI DVLRQVRKKS RLPIIMLTAK GDNIDRVIGL EMGADDYMPK PCYPRELVAR LRAVLRRFEE QPTLSSIDSG IITQGGLTLN PSTRSSEWQG KPFDLTASEF NLLELLLRSP ERVVTKDELS DKGLGRPREA YDRSVDVHIS NIRQKLAALP GNHLNIETVR SIGYRIR
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