Gene YpAngola_A2686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A2686 
SymbolmltD 
ID5801158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp2810503 
End bp2811690 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content46% 
IMG OID641340549 
Productmembrane-bound lytic murein transglycosylase D 
Protein accessionYP_001607087 
Protein GI162421189 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.83719 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.0402839 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTGGAACT TCATCAAAGA CGAGCTGAAG ATGAAGGTTC CGGAGAATTC CCGGATCCGT 
GAACAAAAAC AGAAATACTT AAAAAATAAG AGCTATCTCC ACGATGTAAC ATTACGGGCA
GAGCCGTACA TGTACCTGAT AGTCGAGCAG ATTAAGAAAC GTAAGATGCC GATGGAACTG
GTACTGCTAC CCATAGTGGA GAGCGCTTTT GACCCACACG CGACATCATC CGCCAATGCC
GCAGGGCTAT GGCAGATTGT GCCAAGTACG GGGCGAAATT ATGGCTTGAA GCAAAATCAA
TGGTATGACG GTCGCAGAGA TGTTGTTGCC TCTACCAAAG CAGCGCTTGA TATATTGGAA
CGCTTGAACA AAATGTTTAA CGGTGACTGG TTATTGACAG TCGCAGCTTA TAACAGCGGT
GAAGGCCGAG TTATGCAAGC GATAAAAGCC AATAAGGCAA AGGGCAAACC GACCGATTTT
TGGGCATTGT CGCTTCCGCG TGAAACGTCA ATTTATGTTC CAAAAATGCT GGCCTTGGGT
GATTTACTCA AGAACAGCAA AAAGTACGGT ATAACCTTGC CTGAGACTGA CAAAGACCGT
GCGCTGGCTC GCGTTGATGT CGATCAACAA ATAGAGCTAA CTCAGGCAGC TGAGATGGCG
GGGATGTCAC TGACAAAGCT GAAATCCTTT AATTCTGGCT ACAAACGCAA TGTAACGGCA
CCGGATGGAC ATGGTCCCCG TTATATTATG TTACCGAAAG CCCATGCTGA GCAGTTGAAA
GACTCATTGG CAGATACTGA TATTACTGCT GTTCAACCTA CAAAATTGGC AACGAACAGT
ACAAAATCAG CATCAAGTTC GCAGTATAAA GTTCGCCCAG GCGATACCTT ATCTACGATT
GCCAAGCGGT TGAATATCAA GACCAGCGAT TTGCAGAGTT GGAACAACTT ACGTGCCAAG
AGCACCTTAA AAGTTGGGCA AACCCTGCAA CTGGCAAGCA ATACAACCAG CAAAAGTATC
ACCTATCAAG TTCGTAAAGG TGATTCCTTT GCCAGTATTG CCAAGCGTCA CGGTGTAAAT
ACCGACGATG TGATGCGATG GAATTCGGTA GTCAGCAAAG CTAACAATTT ACAACCAGGC
TTGAAATTGA CGTTATTCGT TAACGACAAA TCAACCCCGG AGGCGTAG
 
Protein sequence
MWNFIKDELK MKVPENSRIR EQKQKYLKNK SYLHDVTLRA EPYMYLIVEQ IKKRKMPMEL 
VLLPIVESAF DPHATSSANA AGLWQIVPST GRNYGLKQNQ WYDGRRDVVA STKAALDILE
RLNKMFNGDW LLTVAAYNSG EGRVMQAIKA NKAKGKPTDF WALSLPRETS IYVPKMLALG
DLLKNSKKYG ITLPETDKDR ALARVDVDQQ IELTQAAEMA GMSLTKLKSF NSGYKRNVTA
PDGHGPRYIM LPKAHAEQLK DSLADTDITA VQPTKLATNS TKSASSSQYK VRPGDTLSTI
AKRLNIKTSD LQSWNNLRAK STLKVGQTLQ LASNTTSKSI TYQVRKGDSF ASIAKRHGVN
TDDVMRWNSV VSKANNLQPG LKLTLFVNDK STPEA