| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A2439 |
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| Symbol | |
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| ID | 5800909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010159 |
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| Strand | - |
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| Start bp | 2556799 |
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| End bp | 2558460 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641340315 |
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| Product | ShlB/FhaC/HecB family haemolysin secretion/activation protein |
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| Protein accession | YP_001606859 |
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| Protein GI | 162419327 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00155436 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0000110124 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAATATTT TTTTTAGAAA AAAATATATG ATTATTTTGT TGCTTAGTAA TGCTGTTTTA
GCAACAGAGA ATAATAAAAA TAGATTAAAT GATAATGTGG TATCACACGC TGACATAGAT
GTGCGTAATG AATATAACGA GGAAGGCAAT AGAGTAGGAA AACGTTTTTT TTCTACAAAC
CATCATAGTG TTGCATCACA GAAAAAAATC TCCCCAGAGA AAATATGCCT GCCAATTACT
GGGGTATTTT TGCAAGGGAA TACATTACTG TCGTCGCAAG ACTTAAATCA GATTGATCAT
ATTCTTGGTG AATGCATTAG TGAAGATGAT ATTAATATCT TAGCCAAGGA AGTGACTCGA
TTATATTTGT CTAAAGGTTA TCTGGCGGCC AGAGTCAATT TCATTCCATT AAATAATGCG
GGGGAGTTGG GACTGAATGT GACTGAGGGT ATTGTTGAAA AAATTGAAGG TGGAGGACGA
AGAGTCAACC CTTATTTTAT ATTCCCTAAC TTTATTGATA AACCCCTTCG GTTATCCGAG
CTTGATCAGG CCATCGATCA GGCTAACAGA CTACGATCAA ATAAAGTAAA CGTCGATATC
TTACCAGGAA GTCAGGCGGG CAAATCAATT ATTAGAATTA ATAATGTCAA TAATAAACCT
TGGAGCTTAT CGACCGTCAT TGATAATTAT GGATATAAAA ATTCTGATGA GTGGCAAGCA
AGAGTGTCAC TGGCTTTAGA TAGCCCATTC GGACTATCTG ATTCTATTAA TTTTAATGCT
AATCGCACGC TAGAGAATGC AAAGAATCGC TATAAGAATG ATTTTACTGT TTCTTATTCG
GTACCTTATG GTGCATTAAC TTTCAGTGCT CTTGCTAATT ATCTGGAATA CCGGCGCTAT
GAGAAATTAA AAAATGGGAC AGTGAATTTT AATGGTAACT CACAGCAGTA TAACTTCCGT
ACTGATTATA TGTTCCATCG TACACAAAAG CAGATAAACA GTTTAAGTAT GCAAGTAGAG
CACAAACAGA TTAATAACTA TGTCGATGAG GCAAAAGTAG GTGTCTACAG TTATCGATTT
ACTAATCTTG AATTAGGTGT CAATCAATTT CGTATTCTTC CTCATGGTTC AGTGAATGTT
AATGCGGCAA TAAAAAGAGG TGTGCCATGG TTTGGTACTC ATCAGAAAAA TAAAATAAAT
GCAGTACAAT TTACCACAGG AAAATTGATG GTTAATTTTA ATCACAATTT CTCTCTATTA
AATTCTCCGT ACCAATTTGA TCATGCTTTA GTTGGGCAAT ACAGTAAGAA TTATGCGCCT
TCTCCTGAGT GGATAAGTTT GACTGAACGT AATGCCATTA GAGGATTTAG TCGTAGTTCA
CAATCGGCAG ATCATGGTTG GTATATGAAA AATACGTTAT CCAAGCACTT TTTTATGGGG
AATATACTTT TTACCCCTCG AATGGGTGTT GATGGCGGAC GTGCTTTAAA GCATGGAAGT
CAGCAAGGGT GGCAAAGTAA TGCGGGTGTG AGTGCTGGTA TATCCATGCG CTATCACCAA
GCATTATTTG ATGTGGAAGC CAGCCGTGGT TGGTGGCTTT CCGATAGTAA TAAACAGAAC
GAACCTGTAC AGGTATTGGG CCGTATAGCT TATACCTTCT AA
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| Protein sequence | MNIFFRKKYM IILLLSNAVL ATENNKNRLN DNVVSHADID VRNEYNEEGN RVGKRFFSTN
HHSVASQKKI SPEKICLPIT GVFLQGNTLL SSQDLNQIDH ILGECISEDD INILAKEVTR
LYLSKGYLAA RVNFIPLNNA GELGLNVTEG IVEKIEGGGR RVNPYFIFPN FIDKPLRLSE
LDQAIDQANR LRSNKVNVDI LPGSQAGKSI IRINNVNNKP WSLSTVIDNY GYKNSDEWQA
RVSLALDSPF GLSDSINFNA NRTLENAKNR YKNDFTVSYS VPYGALTFSA LANYLEYRRY
EKLKNGTVNF NGNSQQYNFR TDYMFHRTQK QINSLSMQVE HKQINNYVDE AKVGVYSYRF
TNLELGVNQF RILPHGSVNV NAAIKRGVPW FGTHQKNKIN AVQFTTGKLM VNFNHNFSLL
NSPYQFDHAL VGQYSKNYAP SPEWISLTER NAIRGFSRSS QSADHGWYMK NTLSKHFFMG
NILFTPRMGV DGGRALKHGS QQGWQSNAGV SAGISMRYHQ ALFDVEASRG WWLSDSNKQN
EPVQVLGRIA YTF
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