Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A2353 |
Symbol | mipA |
ID | 5800823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 2466435 |
End bp | 2467256 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641340238 |
Product | hypothetical protein |
Protein accession | YP_001606782 |
Protein GI | 162421816 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3713] Outer membrane protein V |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00000266286 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.096147 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGATTTACA CTAAGTTAGC TGATTATTTT GTTACTAAGG GAATTTACTT CGTGAAAAAA GATCGTAAAG AAATGAACCA AATAAAAACG CTGGCGGCTT TAACGGTTGC ATTGGCTGTT TGCATGCCAA CCGCCAATGC GGGAAATTGG TCTCTGGGGG CTTCTGCATT AGTCAGCCCG GACCCTTACC GTGGCAAGAA TGATCGTGTC TATCCCGTAC CTGTTGTCTC TTATGAGAGC GATAATTTTT ACTTCCGAAC GCTGGCAGCA GGTTATTACC TGTGGAACGA TAGCAGTAAT CGTTTATCCA TCGATGCTTT CTACTCACCA CTGCACTTCA AACCCGGTGA CAGTGACGAT CAGCAGATGA AGCAACTCAA TAGACGTCGT AGCACCATGA TGGCAGGGAT GTCTTATTCT CACATTGAGG ATTGGGGGAC TCTGCGTGCG ATGTTTGCTG GTGATATATT GGATAACAGT GATGGTTTTG TCGGTGACTT AGCGTATTTG TACCGCTTTA GCATTGATAG CTGGACGTTA ACGCCGGGTG TCGGTGTGAG TTGGAGCAGC AAAGATCAGA ATAGCTATTA TTATGGTGTG AGCCGTGGTG AGTCTGCGCG CAGTGGTTTG GCTGAATATA ACCCAAGCGA TAGCTGGTCA CCGTATTTGG AGCTGTCTGC TAATTACAAC ATCAATCCAA ATTGGAATGC TTTCTTTACT GGCCGTTATA TCCGTCTGGC TAATGAAGTT AAAAACAGCC CAATGGTGGA TCAATCATAC ACTGGCGTGT TGTGGACAGG CGTTACCTAT ACATTCCGCT AA
|
Protein sequence | MIYTKLADYF VTKGIYFVKK DRKEMNQIKT LAALTVALAV CMPTANAGNW SLGASALVSP DPYRGKNDRV YPVPVVSYES DNFYFRTLAA GYYLWNDSSN RLSIDAFYSP LHFKPGDSDD QQMKQLNRRR STMMAGMSYS HIEDWGTLRA MFAGDILDNS DGFVGDLAYL YRFSIDSWTL TPGVGVSWSS KDQNSYYYGV SRGESARSGL AEYNPSDSWS PYLELSANYN INPNWNAFFT GRYIRLANEV KNSPMVDQSY TGVLWTGVTY TFR
|
| |