Gene YpAngola_A2309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A2309 
SymbolrluB 
ID5800779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp2424294 
End bp2425328 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content51% 
IMG OID641340199 
Product23S rRNA pseudouridylate synthase B 
Protein accessionYP_001606744 
Protein GI162419712 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 
TIGRFAM ID[TIGR00093] pseudouridine synthase 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGA AGTCAGAAAA GCAAAAGTTA CCAACCCCAA ATCCACACAC CCCTGCTAAG 
CCACAGGGCG CTAAAATTGT GGGTGAAAAA TTACAGAAAA TCCTGGCGCG CGCTGGCCAT
GGTTCTCGTC GTGAAATTGA AGCCATTATC CAGCAAGGCC GCGTCAGTGT TGACGGTAAA
GTGTCAAAGC TAGGTGATCG TGTAGAAGTG ACCCAGTCCA CTAAAATTCG TCTGGATGGT
CATCTTCTTT CAATTAAAGA ATCTGAAGAA AATGTGTGCC GCGTTCTGGC GTATTACAAG
CCAGAAGGTG AGCTTTGTAC GCGTAATGAT CCGGAAGGTC GTCCAACGGT ATTTGACCGT
TTACCTAAAC TGCGTGGTTC ACGTTGGGTT GCGGTTGGTC GTTTGGATGT GAACACCTCT
GGTTTATTAC TGTTCACTAC CGATGGCGAA TTGGCTAACT GCCTGATGCA CCCAAGCCGT
GAAGTTGAGC GTGAATATGC GGTGCGGGTA TTTGGTCAAA TCGATGATGA TAAAATCAAA
CAGTTGAGCC GTGGTGTACA ACTGGAAGAT GGCCCTGCGG CATTTCGTAC TATCAGCTAC
CAGGGTGGTG AAGGGATAAA CCAGTGGTAT AACGTTACGT TGACCGAAGG GCGTAATCGC
GAAGTTCGCC GTCTATGGGA AGCCGTAGGC GTGCAGGTTA GCCGCCTGAT TCGTGTGCGT
TATGGCGACA TTAATTTGCC GAAAGGCCTG CCACGGGGTG GCTGGACTGA ACTGGATCTT
AAAGCCACTA ACTACCTGCG TGAATTGGTC GAACTGGATG TTGAAACCGT CAGTAAATTA
CCCGTTGAGA AAGATCGTCG CCGGGTTAAA GCCAACCAAA TCCGTCGTGC AGTTAAGCGC
CATACCGAAG TCTCGGGCCG CCAGGTTGCT GGCCGTCAGG GTTCAGCCCG TAAAGGCTCT
ACGCGTCAAA ACGTGGGTAA TGCGGCACCC GCAGCCACGG CAAGTCGCCG TAGTGGCCCG
AAAAAACGCG GTTAA
 
Protein sequence
MSEKSEKQKL PTPNPHTPAK PQGAKIVGEK LQKILARAGH GSRREIEAII QQGRVSVDGK 
VSKLGDRVEV TQSTKIRLDG HLLSIKESEE NVCRVLAYYK PEGELCTRND PEGRPTVFDR
LPKLRGSRWV AVGRLDVNTS GLLLFTTDGE LANCLMHPSR EVEREYAVRV FGQIDDDKIK
QLSRGVQLED GPAAFRTISY QGGEGINQWY NVTLTEGRNR EVRRLWEAVG VQVSRLIRVR
YGDINLPKGL PRGGWTELDL KATNYLRELV ELDVETVSKL PVEKDRRRVK ANQIRRAVKR
HTEVSGRQVA GRQGSARKGS TRQNVGNAAP AATASRRSGP KKRG