Gene YpAngola_A2254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A2254 
Symbol 
ID5800724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp2358563 
End bp2359144 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content50% 
IMG OID641340153 
ProductNa(+)-translocating NADH-quinone reductase subunit E 
Protein accessionYP_001606698 
Protein GI162420285 
COG category[C] Energy production and conversion 
COG ID[COG4657] Predicted NADH:ubiquinone oxidoreductase, subunit RnfA 
TIGRFAM ID[TIGR01943] electron transport complex, RnfABCDGE type, A subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0777104 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.989947 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAT ACCTGCTCCT ATTTGTCGGC ACAGTTTTGG TAAATAACTT TGTTCTGGTC 
AAGTTTCTTG GCCTGTGCCC GTTTATGGGC GTCTCTAAAA AACTGGAAAC CGCCATTGGT
ATGGGTCTGG CGACCACTTT CGTGCTGACA TTGGCATCGG TTTGCGCCTG GATGGTCAAT
AGCTTTATTT TGCTGCCACT CGGCCTGATC TATTTGCGAA CACTGGCCTT CATTTTAGTT
ATCGCTGTCG TGGTGCAATT CACCGAGTTG GTGGTCCGCA AAACCAGCCC GACACTTTAC
CGCTTGCTGG GTATCTTTCT CCCCCTGATC ACCACCAATT GTGCCGTTTT AGGGGTCGCA
CTACTCAATG TGAATCAATC GCATAATTTC ATGCAATCCG CGGTCTATGG TTTTAGTGCT
GCTGCGGGTT TCTCTTTGGT CATGGTGTTA TTTGCCGCTA TTCGTGAGCG CCTGGCTGTG
GCGGATGTCC CTGCGCCCTT CCGTGGGTCT TCTATCGCCT TAATCACTGC CGGGCTGATG
TCTCTGGCCT TTATGGGCTT TACCGGTTTG GTGAAGTTCT AA
 
Protein sequence
MTEYLLLFVG TVLVNNFVLV KFLGLCPFMG VSKKLETAIG MGLATTFVLT LASVCAWMVN 
SFILLPLGLI YLRTLAFILV IAVVVQFTEL VVRKTSPTLY RLLGIFLPLI TTNCAVLGVA
LLNVNQSHNF MQSAVYGFSA AAGFSLVMVL FAAIRERLAV ADVPAPFRGS SIALITAGLM
SLAFMGFTGL VKF