| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A2250 |
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| Symbol | rnfD |
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| ID | 5800720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010159 |
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| Strand | - |
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| Start bp | 2353385 |
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| End bp | 2354479 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641340150 |
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| Product | electron transport complex protein RnfD |
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| Protein accession | YP_001606695 |
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| Protein GI | 162420322 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4658] Predicted NADH:ubiquinone oxidoreductase, subunit RnfD |
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| TIGRFAM ID | [TIGR01946] electron transport complex, RnfABCDGE type, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000198545 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.637976 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTCA GGCCTGTAAC ACCGACCCAG AACAAAGGGT TGCAGATTGC CAGTTCCCCT
TTTACCCACA ATCAACGCAG TACCCGTCGT ATTATGCTGC TGGTTATTCT GGCCTGTATT
CCGGGGATTA TCGCCCAGAC TTACTTCTTC GGTTATGGCA GCCTGATTCA AGTCATGCTG
GCTATGATCA CTGCACTGTT GGCCGAAGGT GCCGTATTGC AGTTACGTAA ACAACCCGTC
ATGGCGCGGT TACAAGATAA CTCAGCCCTA CTGACTGCCT TATTGTTGGG GATAAGCCTC
CCCCCATTGG CCCCCTGGTG GATGATCGTG CTGGGCACGC TATTTGCTAT TGTCATTGCC
AAACAACTCT ATGGTGGCCT AGGGCAGAAC CCGTTTAACC CGGCAATGGT CGGTTATGTT
GTGCTCCTTA TTTCATTTCC GGTACAAATG ACCAGTTGGC TGCCACCGCT ACCGTTGCAA
GGAACGTCGG TGGGATTCTA TGACAGTCTC TTAACCATTT TCACCGGTTA TACCCACAGT
GGTGAGAATA TTCATCAGCT CCAAGTTGGC TATGACGGCA TCAGCCAAGC GACGCCACTG
GATACGTTTA AGACCTCGCT ACGTTCACAG CCAGCAGATC AAATTCTGCA ACAGCCCATA
TTTGGCGGTG TGCTGGCGGG TTTAGGCTGG CAATGGGTTA ATACCGGCTT TCTGGTTGGC
GGCTTATTGC TACTGTGGCG TAAAGCTATT CACTGGCATA TTCCCGTGAG CTTCCTGCTC
GCCTTAGGAG GTTGTGCCGC AGTGAGCTGG ATGATTGCTC CACAAAGCTT TGCCTCACCA
ATGCTACATT TGTTCTCCGG TGCCACCATG TTAGGTGCAT TTTTCATTGC TACCGATCCT
GTCAGTGCCT CTACAACACC CCGTGGCCGC CTGATATTTG GTGCCCTCAT TGGTATTCTG
GTGTGGCTAA TCCGGGTATA TGGCGGCTAT CCGGATAGTG TTGCTTTTGC CGTGTTGCTC
GCCAATATTA CAGTTCCGTT GATTGACCAC TATACCCAAC CTCGGGTCTA TGGCCATAAA
AGCGGGCACA AATAA
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| Protein sequence | MKFRPVTPTQ NKGLQIASSP FTHNQRSTRR IMLLVILACI PGIIAQTYFF GYGSLIQVML
AMITALLAEG AVLQLRKQPV MARLQDNSAL LTALLLGISL PPLAPWWMIV LGTLFAIVIA
KQLYGGLGQN PFNPAMVGYV VLLISFPVQM TSWLPPLPLQ GTSVGFYDSL LTIFTGYTHS
GENIHQLQVG YDGISQATPL DTFKTSLRSQ PADQILQQPI FGGVLAGLGW QWVNTGFLVG
GLLLLWRKAI HWHIPVSFLL ALGGCAAVSW MIAPQSFASP MLHLFSGATM LGAFFIATDP
VSASTTPRGR LIFGALIGIL VWLIRVYGGY PDSVAFAVLL ANITVPLIDH YTQPRVYGHK
SGHK
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