Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A2212 |
Symbol | ldhA |
ID | 5800682 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 2307703 |
End bp | 2308695 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641340115 |
Product | D-lactate dehydrogenase |
Protein accession | YP_001606660 |
Protein GI | 162419031 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.259449 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTAG CCGTTTACAG TACCAAGCAG TATGACCGTA AATACCTTGA GCTGGTCAAC AAAGATTTTG GCTTTGAATT GGAGTTTTTC GATTTTCTGC TTACCCCCAA AACCGCCAAA ATGGCTGAGG GCTGTCAGGC GGTATGTCTC TTCGTCAATG ATGATGGCTG CCGCGAAATA TTAACTGAAC TGGCGACTAT CGGCGTTAAA ATTCTGGCAT TGCGTTGTGC TGGCTTTAAT AACGTGGATC TGGAAGCGGC CAAAGAGTTG GGTATACAAG TGGTCCGAGT GCCCGCATAT TCACCTGAAG CTGTCGCGGA ACATACCGTT GGCATGATGC TGAGCCTTAA CCGACGTATT CACCGTGCTT ATCAGCGAAC CCGTGATGCC AATTTCTCGC TGGAAGGTTT GATTGGTTTC AATATGCATA ACCGTACTGC GGGGATTATC GGCACAGGTA AAATTGGTGT TGCCACCATG CGTATCCTTA AAGGTTTTGG TATGCGCCTG CTGGCGTTTG ACCCTTATCC AAGTGAGCAA GCTCTAGAGC TAGGTGCAGA ATATGTTGAT CTGAAGACCT TGTACGCCGA GTCTGATGTT ATCTCACTGC ATTGCCCGAT GACGCCAGAA AACCATCATT TGCTCAATAA GCAGTCATTT GATCAAATGA AAGATGGCGT GATGATCATT AATACCAGCC GTGGCGGTTT AATTGATTCA ACGGCGGCGA TCGATGCGTT AAAACAACAG AAAATAGGCT CCCTCGGCAT GGACGTTTAT GAAAATGAAC GTGATTTATT CTTTGAAGAT AAATCCAATG ACGTGATTCA GGATGATGTT TTCCGCCGTT TGTCCTCTTG CCATAATGTG TTATTTACTG GGCATCAGGC GTTCCTAACC GAGGAAGCAC TCACCAGTAT CTCTGTCACC ACCTTGCAGA ATATTGCTCA GTTGGATAAA GGCGAACCCT GCCCAAATAT CATCACCCTC TGA
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Protein sequence | MKLAVYSTKQ YDRKYLELVN KDFGFELEFF DFLLTPKTAK MAEGCQAVCL FVNDDGCREI LTELATIGVK ILALRCAGFN NVDLEAAKEL GIQVVRVPAY SPEAVAEHTV GMMLSLNRRI HRAYQRTRDA NFSLEGLIGF NMHNRTAGII GTGKIGVATM RILKGFGMRL LAFDPYPSEQ ALELGAEYVD LKTLYAESDV ISLHCPMTPE NHHLLNKQSF DQMKDGVMII NTSRGGLIDS TAAIDALKQQ KIGSLGMDVY ENERDLFFED KSNDVIQDDV FRRLSSCHNV LFTGHQAFLT EEALTSISVT TLQNIAQLDK GEPCPNIITL
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