Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A2164 |
Symbol | |
ID | 5800634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 2263318 |
End bp | 2263962 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641340071 |
Product | hypothetical protein |
Protein accession | YP_001606616 |
Protein GI | 162418659 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2095] Multiple antibiotic transporter |
TIGRFAM ID | [TIGR00427] membrane protein, MarC family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.033055 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.026113 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTCAAT CACTGTTGGA CCTTTCAGGT TACATCAAGT TTTTTGTTGG CTTATTTGCA CTGGTTAACC CAGTAGGCAT ATTGCCGGTC TTTATTAGTA TGACAAGCTA TCAGGCTGCT GCTGGGCGAG ATAAAACGAA TCTAACGGCG AACTTATCAG TAGCCATAAT TTTGTGGATC TCCTTGTTCC TTGGGGATGC CATTCTGACA ATTTTTGGTA TTTCTATTGA TTCATTCCGG ATTGCTGGCG GAATTCTGGT CGTCAGTATT GCGATGTCGA TGATCAGCGG TAAGCTTGGC GAGGATAAGC AAAACAAGCA GGAAAAAACT GAAACAGCGG TTCGGGAGAG TATTGGTGTT GTCCCATTGG CACTGCCTTT AATGGCTGGA CCAGGAGCAA TCAGCTCTAC CATAGTCTGG AGCTCCCGTT ACCATAGCTG GCAGAATTTA TTGGGGCTGA CTGTGGCTAT AGCACTGTTT GCTTTCTGTT GTTGGTTGCT GTTTCGTGCC GCTCCATTGC TTGTTCGTCT GCTGGGGCAG ACAGGTATTA ACGTCATAAC ACGAATTATG GGGTTATTGC TGATGGCATT GGGCATTGAG TTTATTGTCA CCGGTATCAA AGCTATTTTC CCCGGATTAC TTTAA
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Protein sequence | MSQSLLDLSG YIKFFVGLFA LVNPVGILPV FISMTSYQAA AGRDKTNLTA NLSVAIILWI SLFLGDAILT IFGISIDSFR IAGGILVVSI AMSMISGKLG EDKQNKQEKT ETAVRESIGV VPLALPLMAG PGAISSTIVW SSRYHSWQNL LGLTVAIALF AFCCWLLFRA APLLVRLLGQ TGINVITRIM GLLLMALGIE FIVTGIKAIF PGLL
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