Gene YpAngola_A2164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A2164 
Symbol 
ID5800634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp2263318 
End bp2263962 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content45% 
IMG OID641340071 
Producthypothetical protein 
Protein accessionYP_001606616 
Protein GI162418659 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2095] Multiple antibiotic transporter 
TIGRFAM ID[TIGR00427] membrane protein, MarC family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.033055 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.026113 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTCAAT CACTGTTGGA CCTTTCAGGT TACATCAAGT TTTTTGTTGG CTTATTTGCA 
CTGGTTAACC CAGTAGGCAT ATTGCCGGTC TTTATTAGTA TGACAAGCTA TCAGGCTGCT
GCTGGGCGAG ATAAAACGAA TCTAACGGCG AACTTATCAG TAGCCATAAT TTTGTGGATC
TCCTTGTTCC TTGGGGATGC CATTCTGACA ATTTTTGGTA TTTCTATTGA TTCATTCCGG
ATTGCTGGCG GAATTCTGGT CGTCAGTATT GCGATGTCGA TGATCAGCGG TAAGCTTGGC
GAGGATAAGC AAAACAAGCA GGAAAAAACT GAAACAGCGG TTCGGGAGAG TATTGGTGTT
GTCCCATTGG CACTGCCTTT AATGGCTGGA CCAGGAGCAA TCAGCTCTAC CATAGTCTGG
AGCTCCCGTT ACCATAGCTG GCAGAATTTA TTGGGGCTGA CTGTGGCTAT AGCACTGTTT
GCTTTCTGTT GTTGGTTGCT GTTTCGTGCC GCTCCATTGC TTGTTCGTCT GCTGGGGCAG
ACAGGTATTA ACGTCATAAC ACGAATTATG GGGTTATTGC TGATGGCATT GGGCATTGAG
TTTATTGTCA CCGGTATCAA AGCTATTTTC CCCGGATTAC TTTAA
 
Protein sequence
MSQSLLDLSG YIKFFVGLFA LVNPVGILPV FISMTSYQAA AGRDKTNLTA NLSVAIILWI 
SLFLGDAILT IFGISIDSFR IAGGILVVSI AMSMISGKLG EDKQNKQEKT ETAVRESIGV
VPLALPLMAG PGAISSTIVW SSRYHSWQNL LGLTVAIALF AFCCWLLFRA APLLVRLLGQ
TGINVITRIM GLLLMALGIE FIVTGIKAIF PGLL