| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A2159 |
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| Symbol | oppF |
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| ID | 5800629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010159 |
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| Strand | - |
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| Start bp | 2256939 |
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| End bp | 2257940 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641340066 |
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| Product | oligopeptide transport ATP-binding protein |
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| Protein accession | YP_001606611 |
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| Protein GI | 162420393 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00546678 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.0666705 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCCA TGACAGAGAA GAAAGTATTA TTAGAAGTGG CTGATTTGAA GGTGTATTTT
AACATTCAAG ATGGAAAACA ATGGTTTTGG CAGCCATCAA AGACACTAAA AGCTGTCGAT
GGTGTCACAT TGCGTTTATA TGAGGGTGAA ACGCTGGGGG TGGTTGGGGA GTCAGGTTGT
GGCAAATCAA CATTTGCCCG AGCTATCATT GGTTTGGTGA AAGCCACCGG AGGGAGCGTT
GCCTGGTTAG GGAAAGACTT GCTCAATATG AGTGATGCAG ACTGGCGTGC GACCCGTAGC
GATATCCAAA TGATATTTCA GGATCCATTA GCGTCATTAA ACCCACGAAT GACCATCGGT
GAAATCATTG CTGAACCATT ACGCACTTAT CATCCAAAAA TTTCACGCCA GGAAGTAAAA
GATAAAGTTA AAGCAATGAT GCTTAAAGTC GGGCTACTGC CTAACTTAAT CAACCGCTAC
CCTCATGAAT TTTCAGGAGG GCAGTGCCAG CGTATTGGTA TTGCCCGCGC ATTGATCCTC
GAACCTAAAC TGGTGATCTG TGATGAGCCA GTCTCTGCCC TTGACGTATC AATTCAAGCT
CAAGTCGTGA ATTTATTGCA GCAATTGCAG CGTGAGATGG GGTTGTCACT TATTTTTATT
GCTCATGATT TAGCGGTGGT AAAACATATT TCTGATCGGG TATTGGTGAT GTATCTAGGC
CACGCGGTGG AGTTGGGGAC CTATGATGAG GTTTACCATA ACCCGCAACA TCCCTATACA
AAAGCATTGA TGTCTGCGGT TCCAATTCCA GATCCAGATA AAGAAAGAGT AAAAGTCATT
CAGTTGCTTG AAGGAGAATT GCCTTCACCG ATTGATCCCC CCTCAGGCTG TGTATTCCGC
ACCCGTTGCC CAATTGCCGG TACGGAATGT GCGAAAACAC GTCCTTTATT AGAAGGGAGT
TTCCGCCACG CGGTTTCGTG CCTTAAAGTT GACCCACTGT AA
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| Protein sequence | MNAMTEKKVL LEVADLKVYF NIQDGKQWFW QPSKTLKAVD GVTLRLYEGE TLGVVGESGC
GKSTFARAII GLVKATGGSV AWLGKDLLNM SDADWRATRS DIQMIFQDPL ASLNPRMTIG
EIIAEPLRTY HPKISRQEVK DKVKAMMLKV GLLPNLINRY PHEFSGGQCQ RIGIARALIL
EPKLVICDEP VSALDVSIQA QVVNLLQQLQ REMGLSLIFI AHDLAVVKHI SDRVLVMYLG
HAVELGTYDE VYHNPQHPYT KALMSAVPIP DPDKERVKVI QLLEGELPSP IDPPSGCVFR
TRCPIAGTEC AKTRPLLEGS FRHAVSCLKV DPL
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